Part of scaffold_96 (Scaffold)

For more information consult the page for scaffold_96 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEC22C ENSTTRG00000009671 (Bottlenosed dolphin)

Gene Details

SEC22 vesicle trafficking protein homolog C (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009148, Bottlenosed dolphin)

Protein Percentage 97.68%
cDNA percentage 97.68%
Ka/Ks Ratio 0.20762 (Ka = 0.0111, Ks = 0.0535)

SEC22C ENSBTAG00000006570 (Cow)

Gene Details

Vesicle-trafficking protein SEC22c

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008631, Cow)

Protein Percentage 94.06%
cDNA percentage 93.29%
Ka/Ks Ratio 0.17173 (Ka = 0.0317, Ks = 0.1848)

SEC22C  (Minke Whale)

Gene Details

SEC22 vesicle trafficking protein homolog C (S. cerevisiae)

External Links

Gene match (Identifier: BACU015662, Minke Whale)

Protein Percentage 99.34%
cDNA percentage 99.45%
Ka/Ks Ratio 0.3331 (Ka = 0.003, Ks = 0.009)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 912 bp    Location:616594..594851   Strand:-
>bmy_03301
ATGTCCATGATCCTTTTTGCCTGTGTGGTTAGGGTGAGGGATGGACTGCCCCTCTCGGCCTCCACTGACTTTTACCACACCCAAGATTTTCTGGAATGCAGGAGACGGCTCAAGACTTTAGCCTTGCGACTGGCCCAGTATCCAGGTCGAGGTTCTGCAGAAGGACTTGACTTCAGTATCCATTTCTCTTCTTCGAGGGATGTGGCCTGCATGGCTATCTGCTCCTGCCAGTGTCCAGCAGCCATGGCCTTCTGCTTCCTGGAGACCCTGTGGTGGGAATTCACAGCTTCCTATGACACCACCTGCATTGGCCTAGCCTCCAGGCCATACGCCTTCCTCGAATTTGACAGCGTCATTCAGAAAGTGAAGTGGCATTTTAACTATGTAAGTTCCACCCAGATGGAGAGCAGCTTAGAAAAAATTCAGGAGGAACTCAAGTTCCAGCCTCCAGTGGTTCTCACTCTGGAGGACGCAGATGTGGCTAACGGGGTGATGAACGGTCACCCACAGATGCACTTGGAGCCTGCTCCTAATTTCCGAATGGAACCTGTGACAGCCCTGGGCATCCTCTCTCTTATTCTCAACATCATGTGYGCTGCCCTGAACCTCATTCGTGGAATTCACCTCGCAGAACATTCTTTACAGGTTGCACAAGAAGAAATTGGAAGTATTCTGGCTTTTCTTATTCCTTTTGTAGCCTGCATTTTCCAGTGTTATTTGTACCTGTTCTACAGTCCAGCCAGGACGATGAAGGTGGTGCTGATGCTGCTTTTTATTTGCCTGGGCAACATGTACCTGCATGGGCTGAGGAACCTCTGGCAAATCCTCTTCCACATAGGAGTGGCTTTCCTGTCTTCCTATCAGATCCTGACGAGGCAGCCTCAGGAGAAGCAGTCTGACTGTGGAGTGTGA

Related Sequences

bmy_03301T0 Protein

Length: 304 aa      View alignments
>bmy_03301T0
MSMILFACVVRVRDGLPLSASTDFYHTQDFLECRRRLKTLALRLAQYPGRGSAEGLDFSIHFSSSRDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTCIGLASRPYAFLEFDSVIQKVKWHFNYVSSTQMESSLEKIQEELKFQPPVVLTLEDADVANGVMNGHPQMHLEPAPNFRMEPVTALGILSLILNIMCAALNLIRGIHLAEHSLQVAQEEIGSILAFLIPFVACIFQCYLYLFYSPARTMKVVLMLLFICLGNMYLHGLRNLWQILFHIGVAFLSSYQILTRQPQEKQSDCGV*