Part of scaffold_94 (Scaffold)

For more information consult the page for scaffold_94 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARCN1 ENSTTRG00000004308 (Bottlenosed dolphin)

Gene Details

archain 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004052, Bottlenosed dolphin)

Protein Percentage 99.58%
cDNA percentage 99.44%
Ka/Ks Ratio 0.14456 (Ka = 0.002, Ks = 0.0141)

ARCN1 ENSBTAG00000006690 (Cow)

Gene Details

Coatomer subunit delta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008799, Cow)

Protein Percentage 98.35%
cDNA percentage 96.97%
Ka/Ks Ratio 0.08454 (Ka = 0.0079, Ks = 0.0934)

ARCN1  (Minke Whale)

Gene Details

archain 1

External Links

Gene match (Identifier: BACU017322, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 99.52%
Ka/Ks Ratio 0.33054 (Ka = 0.003, Ks = 0.0091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1455 bp    Location:645236..628875   Strand:-
>bmy_03266
ATGACCCGAACTCGGATTGAGGGCTTGTTAGCAGCTTTTCCAAAGCTCATGAACACTGGAAAACAACACACATTTGTTGAAACAGAGAGTGTCAGATATGTTTACCAGCCTATGGAGAAACTGTACATGGTACTGATCACTACCAAAAACAGCAACATCTTAGAAGATCTGGAGACCCTAAGGCTCTTCTCAAGAGTGATTCCTGAATATTGCCGAGCCTTAGAAGAGAATGAAATATCTGAGCACTGTTTTGATTTGATTTTTGCATTTGATGAAATTGTTGCCCTGGGATACCGGGAGAATGTTAACCTGGCACAGATCAGAACCTTCACAGAAATGGATTCTCATGAGGAGAAGGTGTTCAGAGCAGTCAGAGAGACTCAAGAACGTGAAGCCAAGGCTGAGATGCGGCGTAAAGCAAAAGAATTACAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAAAAAGCACCAGGATTTGGGGGATTTGGAAGCTCCACAGTGTCTGGAGGTAGCACAGCTGCTATGATCACAGAGACCATCATTGAAACTGATAAACCAAAAGTGGCACCTGCACCAGCCAGGCCTTCAGGCCCTAGCAAGGCTTTGAAACTGGGAGCCAAAGGAAAGGAAGTAGATAACTTTGTTGACAAATTGAAATCTGAAGGTGAAACTATCATGTCCTCCAGTATGGGCAAGCGTACCTCTGAAGCAACCAAAGTGCATGCTCCAGCCATTAATATGGAGAGTGTGCACATGAAGATTGAGGAAAAGATCACGCTAACCTGTGGACGAGATGGAGGATTACAGAATATGGAGTTGCATGGCATGATCATGCTTAGGATCTCAGATGATAAATTTGGCCGAATTCGTCTTCATGTGGAAAATGAAGACAAGAAAGGGACCCATCCAAATGTGGATAAAAAACTTTTCACTGCAGAATCTCTAATTGGCTTGAAGAATCCAGAGAAGTCATTTCCAGTCAGTAGTGACGTTGGGGTGCTAAAGTGGAGACTGCAAACCACAGAGGAGTCTTTTATTCCACTGACAATTAATTGCTGGCCCTCAGAAAGTGGAAATGGTTGTGATGTCAACATAGAATATGAGCTACAAGAAGATAATTTAGAACTGAATGATGTGGTTATCACCATCCCACTCCCATCTGGTGTCGGCACACCGGTGATTGGTGAGATTGATGGCGAATATCGACATGACAGTCGACGAAATACCTTGGAGTGGTGCCTGCCAGTGATTGATGCCAAAAATAAGAGTGGCAGCCTTGAGTTCAGCATTGCTGGGCAGCCCAATGATTTCTTCCCTGTTCAAGTCTCCTTCATCTCCAAAAAAAATTACTGTAACATACAGGTTACCAAAGTGACCCAGGTAGATGGAAACAGCCCTGTAAGGTTTTCCACAGAGACCACTTTCCTAGTGGATAAGTATGAAATTCTGTAA

Related Sequences

bmy_03266T0 Protein

Length: 485 aa      View alignments
>bmy_03266T0
MTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAPGFGGFGSSTVSGGSTAAMITETIIETDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKVHAPAINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGTHPNVDKKLFTAESLIGLKNPEKSFPVSSDVGVLKWRLQTTEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGTPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL*