Part of scaffold_94 (Scaffold)

For more information consult the page for scaffold_94 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZD3 ENSTTRG00000005472 (Bottlenosed dolphin)

Gene Details

PDZ domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005163, Bottlenosed dolphin)

Protein Percentage 95.81%
cDNA percentage 96.81%
Ka/Ks Ratio 0.30143 (Ka = 0.0203, Ks = 0.0672)

PDZD3 ENSBTAG00000012507 (Cow)

Gene Details

Na(+)/H(+) exchange regulatory cofactor NHE-RF4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023657, Cow)

Protein Percentage 89.92%
cDNA percentage 91.6%
Ka/Ks Ratio 0.32369 (Ka = 0.0585, Ks = 0.1808)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 777 bp    Location:175877..171649   Strand:-
>bmy_03243
ATGCCCCTGGCTGCACCCCTGGCAGAGGGCTGGGCACTGCCCACCAAGCCCCGCTGTCTGCATCTAGAGAAAGGGCCCCAGGGCTTCGGGTTCATGCTCCGAGAGGAGAAGGGCCTTGACGGTCGGCTCGGTCAGTTCCTGTGGGAGGTGGACCCAGGACTGCCAGCGGAGAAGGCCGGGATGCAGGCTGGGGACCGGCTGGTGGCTGTGGCTGGGGAGAGCGTGGAAGGGCTGGGCCATGAAGAGACAGTGTCCAAGATCCGGGCGCAAGGCTCCTGCGTCTCGCTCATTGTCGTCGACCCCGAGGCTGACCGCTTCTTCAACATGGTTCGCTTGTCCCCACTTCTCTTCTTGGAGAGCACAGAGGCTCCCGACTCTCCCCAGGATACTGGCTCAGCCTCTCTGGTTGAGACCAAGGACCCACCAGTTGAAGACACAACCGTCCCCTGCGGCTTCCGCCAGTGCTTCCTGTACCCTGGGCCTGGCGGTGGCTATGGCTTCCGACTCAGCTGTGTGGCCAGTGGGCCTCATCTCTTCATCTCCCAGGTGACCCTAGGAGGCTCAGCTGCCCGGGCAGGACTGCAAATGGGAGATGTGATTCTGGAGGTGAACGGGTATCCCATGGGCGGAGAGAATGACCTGGAAAGACTTCAGCAGCTGGCTGAGGCGGAGCCACCCCTATGCCTGAAGCTGGCGGCCAGATCTCAGCAGGGCTTGGAAGCCTGGATTCCCCCAGGGTCTGGAGAGGACTGGGCTGTAGCCTCAGATCTACTGTAG

Related Sequences

bmy_03243T0 Protein

Length: 259 aa      View alignments
>bmy_03243T0
MPLAAPLAEGWALPTKPRCLHLEKGPQGFGFMLREEKGLDGRLGQFLWEVDPGLPAEKAGMQAGDRLVAVAGESVEGLGHEETVSKIRAQGSCVSLIVVDPEADRFFNMVRLSPLLFLESTEAPDSPQDTGSASLVETKDPPVEDTTVPCGFRQCFLYPGPGGGYGFRLSCVASGPHLFISQVTLGGSAARAGLQMGDVILEVNGYPMGGENDLERLQQLAEAEPPLCLKLAARSQQGLEAWIPPGSGEDWAVASDLL*