Part of scaffold_92 (Scaffold)

For more information consult the page for scaffold_92 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KPNA1 ENSTTRG00000013404 (Bottlenosed dolphin)

Gene Details

karyopherin alpha 1 (importin alpha 5)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012719, Bottlenosed dolphin)

Protein Percentage 98.2%
cDNA percentage 97.6%
Ka/Ks Ratio 0.23485 (Ka = 0.0134, Ks = 0.0572)

KPNA1 ENSBTAG00000011143 (Cow)

Gene Details

Importin subunit alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014799, Cow)

Protein Percentage 97.97%
cDNA percentage 95.42%
Ka/Ks Ratio 0.09566 (Ka = 0.0142, Ks = 0.1484)

KPNA1  (Minke Whale)

Gene Details

karyopherin alpha 1 (importin alpha 5)

External Links

Gene match (Identifier: BACU020077, Minke Whale)

Protein Percentage 97.97%
cDNA percentage 98.2%
Ka/Ks Ratio 0.5166 (Ka = 0.0149, Ks = 0.0289)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:1995813..2030576   Strand:+
>bmy_03229
ATGTCAGATGGAGGCTTCCATGAGGCTCAGATTAATAACATGGAGATGGCACCAGGTGGTGTTATTACTTCTGACATGATTGAAATGATATTTTCCAATAGCCCAGAGCAACAGCTTTCAGCAACGCAGAAATTCAGAAAACTGCTTTCAAAAGAACCTAATCCTCCTATTGATGAAGTCATCAGCACACCAGGAGTAGTGGCCAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATTGTACATTGCAGTTTGAGTCAGCTTGGGTACTGACAAATATTGCTTCAGGAAATTCTCTTCAGACCCGGATTGTGATTCAGGCAGGAGCTGTGCCTATCTTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTCCAGGAGCAGGCAGTCTGGGCTCTTGGCAACATTGCTGGAGATAGTACCATGTGCAGGGACTATGTTTTAGACTGCAATATTCTTCCGCCTCTGCTGCAGTTATTTTCAAAGCAAAATCGCCTGACCATGACCAGGAATGCAGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCCCCTCCAGAATTTGCAAAGGTTTCCCCCTGTCTGAACGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTACTGGCTGATGCCTGCTGGGCCCTCTCATATCTATCAGATGGACCCAATGATAAAATTCAAGCAGTCATTGATGCAGGAGTATGTAGGAGACTTGTGGAGCTGCTGATGCATAATGATTATAAAGTGGTTTCTCCTGCTTTGCGAGCTGTGGGAAACATTGTCACAGGCGATGATATTCAGACACAGGTAATTTTGAATTGCTCAGCTCTGCAGAGTTTATTGCATTTGCTGAGTAGCCCAAAGGAGTCTATCAAAAAGGAAGCATGTTGGACAATATCTAACATCACAGCTGGAAATAGGGCACAGATCCAGTGCTCTGTTGGGAATTTCAACATGAGAAGGTACCTCGTAGAACTGGGCTGTATCAAGCCACTCTGTGATCTCCTCACAGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCTTGGAGAACAAGAAGCCAAAAGGAATGGCACTGGCATTAATCCTTACTGTGCTTTGATTGAAGAAGCTTATGGTCTGGATAAAATTGAATTCTTACAGAGTCATGAAAACCAAGAGATCTACCAGAAGGCCTTTGACCTTATTGAGCATTACTTCGGGACTGAGGATGAAGACAGCAGCATTGCACCCCAGGTTGACCTTAGCCAGCAGCAGTACATCTTCCAGCAGTGTGAGGCGCCTATGGAAGGTTTCCAGCTTTGA

Related Sequences

bmy_03229T0 Protein

Length: 445 aa      View alignments
>bmy_03229T0
MSDGGFHEAQINNMEMAPGGVITSDMIEMIFSNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQCSVGNFNMRRYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTEDEDSSIAPQVDLSQQQYIFQQCEAPMEGFQL*