Part of scaffold_92 (Scaffold)

For more information consult the page for scaffold_92 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPBAP1 ENSTTRG00000011749 (Bottlenosed dolphin)

Gene Details

HSPB (heat shock 27kDa) associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011146, Bottlenosed dolphin)

Protein Percentage 96.59%
cDNA percentage 97.83%
Ka/Ks Ratio 0.43614 (Ka = 0.0161, Ks = 0.0369)

HSPBAP1 ENSBTAG00000005066 (Cow)

Gene Details

HSPB1-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006679, Cow)

Protein Percentage 87.7%
cDNA percentage 91.48%
Ka/Ks Ratio 0.45662 (Ka = 0.0689, Ks = 0.1508)

HSPBAP1  (Minke Whale)

Gene Details

HSPB (heat shock 27kDa) associated protein 1

External Links

Gene match (Identifier: BACU006073, Minke Whale)

Protein Percentage 98.15%
cDNA percentage 98.97%
Ka/Ks Ratio 0.73806 (Ka = 0.0086, Ks = 0.0117)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 975 bp    Location:1811121..1828587   Strand:+
>bmy_03224
ATGGGGGCCCATACACCCTGTCATCTGGACACCTATGGTTGCAACCTAGTATTCCAGGTACAAGGAAGGAAAAGATGGCATCTCTTTCCTCCTGAAGATACTCCATTCCTTTATCCAACTAGAATCCCTTATGAAGAATCTAGTGTGTTCAGTAAAATCAATGTTGTCAATCCTGATTTAAAATGTTTTCCTCAATTCTGGAAGGCTCGAAGACATATGGTTACCCTGAGCCCCGGACAGGTTCTGTTTGTCCCCAGACACTGGTGGCATTATGTGGAATCCATTGATCCTGTCACTGTCAGTATAAACTCATGGATTGAGCTGGAAGAGGACCACCAAGCCCGGGTAGAAGAGGCAATCACCCGCATGCTTGTGTGTGCCCTGAAAACTGCAGAGAATCCACATGATACCAGAGCTTGGTTAAACCCAACTGAGGTTGAGGAAACATCCCATGAAGTCAATTGTCGCTACTTAAATGGAGCCGTTTCTGCTTTTTTTGATCATTATGGAACATCTAAGGTAGTAGAAACCCAAGCGCTGAGCACAAACGGAGAGTACRTGATAAAGGAAGAATTAAATGTGCACAACCACGTGGAGGTAGAACAAACTAGTAGCCACAGCTTAACCTTGGGAACAGTAAGTCAGGAGGCAGCAAGTCCCTTTGGTCCTGATCTGGTTCCTGTGATACCAGGTTCCCAAGAACCACCCTCAGAAAGAGGAGGCATGTTTGAAAGTGATGGTGAAGACTTTGTTGACAAAAATGGAAAACGCTTTGGAAAATTGCATTATACCAAGAGACAACGAATGATGAGTGAAAGTGAGAATGCAGTAGTGGAACAAATTGCTTCAAATAGTACTGTGGCCCCTTCCCAGACATTCCTTTCTACAGATGACTTGCTGGATTGCTTGGTGAATCCACAGGTAACCAGGATAGTGGCACAACTTTTGATTCAAGGAAGAAGTTTGCGACTCTAA

Related Sequences

bmy_03224T0 Protein

Length: 325 aa      View alignments
>bmy_03224T0
MGAHTPCHLDTYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKCFPQFWKARRHMVTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEEDHQARVEEAITRMLVCALKTAENPHDTRAWLNPTEVEETSHEVNCRYLNGAVSAFFDHYGTSKVVETQALSTNGEYXIKEELNVHNHVEVEQTSSHSLTLGTVSQEAASPFGPDLVPVIPGSQEPPSERGGMFESDGEDFVDKNGKRFGKLHYTKRQRMMSESENAVVEQIASNSTVAPSQTFLSTDDLLDCLVNPQVTRIVAQLLIQGRSLRL*