Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DDX39B ENSTTRG00000014074 (Bottlenosed dolphin)

Gene Details

DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013346, Bottlenosed dolphin)

Protein Percentage 92.74%
cDNA percentage 92.19%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0192)

DDX39B ENSBTAG00000014490 (Cow)

Gene Details

Spliceosome RNA helicase DDX39B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029090, Cow)

Protein Percentage 99.77%
cDNA percentage 97.27%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0924)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1962 bp    Location:2127693..2139965   Strand:+
>bmy_03160
ATGGCAGAGAACGATGTGGACAATGAGCTCTTGGATTATGAAGATGATGAGGTGGAGACAGCAGCTGGGGGAGATGGGGCTGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTACGTTTCCATTCACAGCTCTGGCTTTCGTGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATTGTTGACTGTGGCTTTGAGCATCCATCAGAAGAGAGGAGCTGGTTGGACCCTTGGGCCAGGCCAACTCTGGTCTCTGGAAACCTTTATGGCTGGTCTAAGGATGGCTGGCTTTTGGTCCAGCATGAATGCATCCCTCAGGCCATCCTGGGAATGGATGTCCTATGCCAGGCCAAGTCAGGCATGGGAAAGACGGCGGTGTTTGTGCTGGCTACACTGCAACAACTGGAGCCAGTTACTGGGCAGGTGTCTGTACTGGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATGAACGCTTCTCTAAATACATGCCCAAYGTCAAGGTCGCAGTGTTTTTTGGTGGTCTGTCTATCAAGAAAGATGAAGAGGTGCTGAAGAAGAACTGCCCGCATATCGTCGTGGGGACCCCTGGCCGCATCCTAGCCCTGGCTCGAAATAAGAGCCTCAATCTCAAACACATTAAACACTTTATCTTGGATGAATGCGATAAGATGCTTGAACAGCTCGACATGCGTCGGGATGTCCAGGAAATTTTTCGCATGACCCCCCATGAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAGAGATTCGCCCAGTCTGCCGCAAGTTCATGCAAGACGTAAATACCCTTCTACCTTCTCTCCCTCCACTCCCCGCCCGCTGCCTCCTCCCCCTCCGCGCCCTCTTCCTCCAGACTCCCTTGTCCTTCAAGCGCCAAGAAGGGGGCACATGCCCATTTGGGAGTGATGACTCCTTGAAGAGACACACAGAGGCAGAGACAGTTAGTGTTAGGGTCTGCGCGGGCGCCAGGGAAACTCCGGAAGACTTGGTCGGGTTAACGAGAGCAAGAGAGGGACAGACAGATGGCAGGGCATTGTCCAAAAGAAGAGCAAACAGCACAGATGAATCCGCTCCCTCCCCACCTCCAGGGGTGGGGGCCTTTGGCACCTCAATCCCCGAGTCCATACTCCTTCCCACCCGTACCTCCTCCTCGCACCCATCCGGAACCTTGGTTGATGTGAGCCGGCAGCAGAGAAGCACCGTGGCGCGGCGGGGGAATGCGGACGGCACCCGGCGGTGGATGGCGGCAGCGGAGGCCGCGGGGAACCTGACCAGGAAGCCGAGGACCAAACCAGCCTCTTTTTCCGTTCCCGGTTTTTTTCCTGAACCCAAGGCGTGCCGTGTTCCCTATTTCCCTCCATTTGTGTTGCCAATGGAGATCTTCGTGGATGATGAGACGAAGCTGACGCTGCATGGGTTGCAGCAGTACTACGTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGACCTTCTGGATGTCCTTGAATTCAACCAGGTGGTGATATTTGTGAAGTCTGTGCAGCGTTGCATTGCCCTGGCCCAGCTCTTGGTGGAGCAGAACTTCCCAGCTATTGCCATCCACCGTGGGATGCCTCAGGAGGAGAGGCTTTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTGTTTGGCCGAGGCATGGACATCGAGCGGGTGAACATTGCCTTTAACTACGACATGCCTGAGGATTCTGACACCTACCTGCATCGGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCCATCACGTTTGTGTCAGATGAGAATGATGCCAAGATTCTCAATGATGTGCAGGATCGCTTTGAAGTCAATATTAGTGAGCTGCCTGATGAGATAGACATCTCCTCCTACATTGAACAGACGCGGTAG

Related Sequences

bmy_03160T0 Protein

Length: 654 aa      View alignments
>bmy_03160T0
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEERSWLDPWARPTLVSGNLYGWSKDGWLLVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDVNTLLPSLPPLPARCLLPLRALFLQTPLSFKRQEGGTCPFGSDDSLKRHTEAETVSVRVCAGARETPEDLVGLTRAREGQTDGRALSKRRANSTDESAPSPPPGVGAFGTSIPESILLPTRTSSSHPSGTLVDVSRQQRSTVARRGNADGTRRWMAAAEAAGNLTRKPRTKPASFSVPGFFPEPKACRVPYFPPFVLPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQTR*