Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AGPAT1 ENSTTRG00000005962 (Bottlenosed dolphin)

Gene Details

1-acylglycerol-3-phosphate O-acyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005639, Bottlenosed dolphin)

Protein Percentage 84.89%
cDNA percentage 85.85%
Ka/Ks Ratio 0.2588 (Ka = 0.0184, Ks = 0.0709)

AGPAT1 ENSBTAG00000004442 (Cow)

Gene Details

1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000005821, Cow)

Protein Percentage 96.82%
cDNA percentage 95.17%
Ka/Ks Ratio 0.12464 (Ka = 0.0196, Ks = 0.1573)

AGPAT1  (Minke Whale)

Gene Details

1-acylglycerol-3-phosphate O-acyltransferase 1

External Links

Gene match (Identifier: BACU019088, Minke Whale)

Protein Percentage 94.1%
cDNA percentage 94.71%
Ka/Ks Ratio 0.35225 (Ka = 0.0389, Ks = 0.1105)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 852 bp    Location:1634252..1636436   Strand:+
>bmy_03115
ATGGAGCTGTGGCCAGGGCTGTGGACTCTCCTGCTGCTGCTCGCCCTCCTGCTGCCCACTCTGTGGTTCTGCAGCCCCAGTGCCAAGTACTTCTTCAAGATGGGCTTCTACAACGGCTGGATCCTCTTCCTGGCTGTGCTCGCCATCCCTGTGTGTGCCGTGCGAGGACGCAACGTCGAGAACATGAAGATCTTGCGTCTGATGCTGCTCCACATCAAATACCTGTACGGGATCCGAGTGGAGGTACGAGGGGCTCACCACTTCCCTCCTTCACAGCCCTATGTGGTCGTCTCCAACCACCAGAGCTCCCTCGACCTGCTTGGGATGATGGAGGTACTGCCAGGCCGCTGTGTGCCCATTGCCAAGCGCGAGCTACTGTGGGCCGGCTCTGCCGGGCTGGCCTGCTGGCTGGCGGGAGTCATCTTCATTGACCGGAAGCGCACTGGGGATGCCATCAGTGTCATGTCTGAGGTCGCCCAGACCCTGATCACACAGGATGTACGGGTCTGGGTTTTTCCTGAGGGCACGAGAAACCACAATGGCTCCATGCTGCCCTTCAAACGTGGCGCCTTCCACCTCGCAGTGCAGGCCCAGGTTCCCATCGTTCCTATAGTCATGTCCTCCTATCAAGACTTCTACTGCAAGAAGGAGCGCCGCTTCACTTCAGGGCGATGTCAGGTACGGGTGCTGCCCCCAGTGCCCACAGAAGGGCTGACACCAGATGACGTCCCAGCTCTGGCCGACACAGTCCGACACTCCATGCTCACCGTTTTCCGGGAAATCTCCACTGATGGCAGGGGTGGTGGTGACTATCTGAAGAAGCCTGGAGGGGTGGGCGAGGCCCAGCTCTGA

Related Sequences

bmy_03115T0 Protein

Length: 284 aa      View alignments
>bmy_03115T0
MELWPGLWTLLLLLALLLPTLWFCSPSAKYFFKMGFYNGWILFLAVLAIPVCAVRGRNVENMKILRLMLLHIKYLYGIRVEVRGAHHFPPSQPYVVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLITQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLTPDDVPALADTVRHSMLTVFREISTDGRGGGDYLKKPGGVGEAQL*