Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF5 ENSTTRG00000013781 (Bottlenosed dolphin)

Gene Details

ring finger protein 5, E3 ubiquitin protein ligase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013072, Bottlenosed dolphin)

Protein Percentage 78.33%
cDNA percentage 78.52%
Ka/Ks Ratio 0.12077 (Ka = 0.0036, Ks = 0.0298)

RNF5 ENSBTAG00000025413 (Cow)

Gene Details

E3 ubiquitin-protein ligase RNF5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035571, Cow)

Protein Percentage 97.78%
cDNA percentage 97.04%
Ka/Ks Ratio 0.10234 (Ka = 0.0082, Ks = 0.0802)

RNF5  (Minke Whale)

Gene Details

ring finger protein 5, E3 ubiquitin protein ligase

External Links

Gene match (Identifier: BACU019691, Minke Whale)

Protein Percentage 99.44%
cDNA percentage 98.7%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.038)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 543 bp    Location:1628076..1625182   Strand:-
>bmy_03114
ATGGCAGCAGCGGAGGAGGAGGACGGGGGCCCCGAAGGGCCAAACCGCGAGCGGGGCGGGGCGGGCGCGACCTTCGAATGTAATATATGTCTGGAGACTGCTCGGGAAGCTGTGGTCAGTGTGTGTGGCCACCTGTACTGTTGGCCCTGTCTCCATCAGTGGCTGGAGGCACGGCCAGAGCGGCAAGAGTGCCCAGTGTGTAAAGCTGGGATCAGCAGAGAAAAGGTTGTCCCCCTTTACGGGCGAGGGAGCCAGAAGCCCCGGGATCCCAGATTGAAAACCCCACCCCGCCCCCAGGGCCAGCGACCCGCTCCAGAGAGCAGAGGGGGATTCCAGCCATTTGGCGATACTGGAGGCTTTCACTTCTCATTTGGTGTTGGTGCTTTTCCCTTTGGCTTTTTCACCACCGTCTTCAATACCCACGAGCCATTCCRTCGGGGTACAGGTGTGGATCTGGGACAGGGTCACCCGGCCTCCAGCTGGCAGGACTCCCTCTTCCTGTTTCTCGCCATCTTCTTCTTTTTCTGGCTGCTCAGTATTTGA

Related Sequences

bmy_03114T0 Protein

Length: 181 aa      View alignments
>bmy_03114T0
MAAAEEEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLEARPERQECPVCKAGISREKVVPLYGRGSQKPRDPRLKTPPRPQGQRPAPESRGGFQPFGDTGGFHFSFGVGAFPFGFFTTVFNTHEPFXRGTGVDLGQGHPASSWQDSLFLFLAIFFFFWLLSI*