Part of scaffold_90 (Scaffold)

For more information consult the page for scaffold_90 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IL17A ENSTTRG00000004836 (Bottlenosed dolphin)

Gene Details

interleukin 17A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004554, Bottlenosed dolphin)

Protein Percentage 91.5%
cDNA percentage 93.46%
Ka/Ks Ratio 0.36048 (Ka = 0.0513, Ks = 0.1422)

IL17 ENSBTAG00000002150 (Cow)

Gene Details

Interleukin-17A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002786, Cow)

Protein Percentage 86.93%
cDNA percentage 88.45%
Ka/Ks Ratio 0.23775 (Ka = 0.0784, Ks = 0.33)

IL17A  (Minke Whale)

Gene Details

interleukin 17A

External Links

Gene match (Identifier: BACU015853, Minke Whale)

Protein Percentage 98.63%
cDNA percentage 99.32%
Ka/Ks Ratio 0.59945 (Ka = 0.006, Ks = 0.0101)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 669 bp    Location:288648..309604   Strand:+
>bmy_03082
CTCCTTCTTACAGCATCAGACCTAAGATCCGTGTACTSAGTCAAGCATGTCCACAGCAAAGTTTTCTCTCATCTGCTGCTACATGAGAGCAACAAAGAYGGGTGTGGCTTTCCAAGAAAATCCCCAGCATCTCAGAAGATTGCTTTTATTATGGAAGCACGGATTCGGATAACCAGGAATGCTACAGTACTAACCCAGTCTCCCACCTCTCTCTCCTTTCCCACCCAGTTCCAGTCACTGCTGCTGCTGCTGAGTCTGGTGGCTCTTGTGAAGGCAGGAATCATAATCCCACAAAGTCCAGGCTGCCCTCATATTGAGGACAAGAACTTCCCACAGTATGTGAGGGTCAACCTAAACATCCTTAACCGGAACACGAATTCCAGAAGACCCTCCGATTACTACAAACGCTCCACCTCACCCTGGACTCTCCACCGCAATGAGGACCCCGAGAGGTACCCCTCTGTGATCTGGGAGGCCAAGTGCAGCCACTCGGGCTGTGTCAATGCTGAAGGGAAGGTGGACCATCACATGAACTCCGTCCCCATCCAGCAAGAGATCCTGGTCCTGCGAAGGGAGCCTCAGCACTGCCCCAACTCCTTCCGGCTGGAGAAGATGCTGGTGGCCGTGGGCTGCACCTGTGTCACCCCCATTGTCCGCCACATGGCTTAA

Related Sequences

bmy_03082T0 Protein

Length: 223 aa      View alignments
>bmy_03082T0
LLLTASDLRSVYXVKHVHSKVFSHLLLHESNKDGCGFPRKSPASQKIAFIMEARIRITRNATVLTQSPTSLSFPTQFQSLLLLLSLVALVKAGIIIPQSPGCPHIEDKNFPQYVRVNLNILNRNTNSRRPSDYYKRSTSPWTLHRNEDPERYPSVIWEAKCSHSGCVNAEGKVDHHMNSVPIQQEILVLRREPQHCPNSFRLEKMLVAVGCTCVTPIVRHMA*