Sequence details bmy_03051 (Coding sequence)

Part of scaffold_87 (Scaffold)

For more information consult the page for scaffold_87 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCLRE1A ENSTTRG00000011991 (Bottlenosed dolphin)

Gene Details

DNA cross-link repair 1A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011371, Bottlenosed dolphin)

Protein Percentage 94.55%
cDNA percentage 97.27%
Ka/Ks Ratio 0.77857 (Ka = 0.0219, Ks = 0.0282)

DCLRE1A ENSBTAG00000020193 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026896, Cow)

Protein Percentage 84.43%
cDNA percentage 91.03%
Ka/Ks Ratio 0.56551 (Ka = 0.079, Ks = 0.1397)

DCLRE1A  (Minke Whale)

Gene Details

DNA cross-link repair 1A

External Links

Gene match (Identifier: BACU004662, Minke Whale)

Protein Percentage 92.51%
cDNA percentage 94.86%
Ka/Ks Ratio 0.51309 (Ka = 0.0412, Ks = 0.0803)

Additional orthologs identified in other species via the OPTIC pipeline.

DCLRE1A (Human)   Dclre1a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3531 bp    Location:1105844..1084481   Strand:-
Raw sequence 
>bmy_03051
ATGTGCCCSCCCTTCACAAACCCCCGGTCCGCCGCCGACGCCGACGCCGCCGCCGCCTGGGGACAGAGGCTCGGCTGGGCGAAGCGCCTCTGTCCGGCACGGCGGCAGAACCACGCCTCGCCCACCGCTTCAGGGGAGGGCGCCGTCCCCGAGGAAGGGGAGGTTCCGGGAGGGGTCCCCACCCCGAAGCCAGCCCCTCACCTTCCGGAAACTCGGGCACTGACAAGTCCTGCTCCCAGCCGTCCACCTTCTGCAGATACTGACCAGGCTGTCCTTCTCCTCCTGGGTGACGGCGTCGAGCAGAGCGTACTCCAGCGAGGTCTGAGCCGGGAGCAGGCCCGAGAGGCTGCAGCTCCGGGCTCCGGGCGCCGCCATGTTCTCTCCGGACGGTCCAGAGGCGGCCGCAGAGCCCGCGGGACGGTCTCGTTTGGAGAGAGAAGGACTTACGGTCCTTTGGTTTCAAAACCGCACATTCGCCTCACTCTCCACCAGCCCCACGCCACGCTCACAGCACTTTTTTCAAATGCTAAAGTACAAATTGACGCAATTCCCAGGCACGTAATTAAACTACCGTCCCAACCTACCCCGCCCCTTCTAAATCTTCTCGCCGCAGCTGAGCCTGGACATTCAGAGCACCAGATTCAACATGGAAAAGGCTTCTGGGCCAGCGCCAGGATCAGCCGATTCGACACAGCATTGGGAAAGCGAAGCTGTTCCCGCCACGGCACGAAAGAGGATGCTTTTCTGGAACAAGAMATCTGGGAATACAAATCCAAAAGAAAACCCAAACCAGTACATCCAAATAATTGCTCTGAGAATATTCCAAAATCTGTTGAAAAAGCAACAGATGGACAATACCAGTCAAAACGAAACAGAAATAAAAAAAGAACTGTAGAAGGTAAAAAGAAGGTTAAGGCCCCCGAAACGTGCCTTGGAGAAACAGACAGTCAGACTTCTGTCGCTTCCAGTCAGAACTCTAGTTGTGGAGATGGTATTCAGCAGTGCCAAGACAGGGAGGCCACTCCAGGAAAGCACTGTAGGACTCACAAAAACAAACACGTGTCTCCGAAGATACGACCAGTTTATGATGGGTACTGTCCAAACTGCCAGATGCCTTTTTCCTCCTTGCTAGGTCAAACACCTCGATGGCATGTTTTTGAGTGTTTGGATTCCATACCAGTCTCCGAAACAGAGTGTCCTGATGCTCTTCAGTGTTCCTCAACAATTCCTTCTCATTACAAGAGATACACTCATCTCCTGCTAGCTCAAAGCAGGGCTAGTAATAGTCCTTTCAGCGATCCATCCCATGAGTCAGTGACACAATGTCTAAGAAAATCTCAGTCTCCAACTGAAACTGATAAAAAGGTTTCCTCTTYGACAAATATCCAAACTTCCCAACAAGTCCCACAATTTACAGAACTTGTTAATGATGACAAACTGGTAGGATTTGGTTTGCCTCTTGCTGAAGAATTAGACAGTCAAAACAGCCCAGAACACAYAAATTTGACATTGCCAGAAAATGACTTTAGCAACTGTGAAATCTCCTATTCTCCACTTCAAAGTGATGAAGAAACTTATGATACAGGTGAAAAGCTGGATGATTCACAACAGGAACTMTTCTTTACGGAAAGCTCTAAAGATGGCAGCCTAGAAGATGAAAATAGCTCCACTTTGTCTAAAAAACTCCATGACCCTTTACTGAAGRACCAGGAGGAGAGCTGCCCCGAAATGGATAGCTTCTTAACTCAGGATAAATACGATGAAGAATTGTATAAATGCAASACTCTAAATGATTCGTCTCAACTTACTTTCCAAAGTAAGAGTGTTATTTTACGTGATGATCCAGCATATACTGATGATGATTTTATATTGTCTCCACCTGCATTAGCAGAGCGGTTTACTTCTCCTAGTTACCAAGCCACTAAAGCAAAACCTGATGAGCCAGAATTTCACTCATCTCAATCAAATAAAGAGAAACAGGTAATTGAAGAATCAGCTGTTTACAATCAAATTTCTCTTCCGTTACTTAAGAGTAAAATGTCAAAACCTTTTGAAAGCCAGGGAGGAGGGTGTCATTCTTTCCAACCAACCCAAAGTAAAACTAGAGAATTATCAAGTAAGAATTTCAATGCTAAGCACAATACGAACGCAGCATGTTTCTGCAGAAGGGCATTAGATGGTATGCTAGACAGTAAAGTTACAGCTGTAAATACAGCGATATTTTCTAGTACACCTACTRCTGCTAAGTCTTTGAAAATATTGCCATCTGGCCCTAAGTGTAATGCATCACAACCTTCTACTAAGGTAATGAAGCAAATGGATATAGGTGTGTATTTTGGACTACCACCCAAAAGAAAAGAAGAGAAATTGCTGGTGGAAAGTGYATTAGAAGGGATGAACTTAAATACAGTTGTAAGTCCTAATGAAAAGAGGTCCCGGCAGTGCAAGAGGAAAAGAGAAAAATCTTTAAGTGATTTAGAATTAGAGGCAAATAATTTAAGTGAGAGTCAGCCCTCTGTGGAACTTTCTCGTAAGAGGTCACAGCATCAAAGAAAGAGACTTAAAAAGTCAGATTCACTGCAGGAAGGAGTACATCAGAAGAGTTCAGGTCACCGTAACAAGACAGAACCTGGAACAGTCAAGTTAAGGAAAGACAGAGTCTTCATAAAATCAGCTCATGGCAGGCTGCAGAGAGGGAACACGAAAATCCCAGAGTCATCGAATGCAGGAGAATTAAGGAAAAGGACATGTCCATTCTATAAGAAAATACCTGGTGCTGTCATGATCCTTTTTTATCTTCCTAAYGGTTATGTCATACTACACACTGGAGACTTCAGAGCAGATCCCACCATGGAACGTTCTCTTCTTGCAGGCCAGAAAGTCCACACACTTTACTTAGATACAACTACCATATTTCCATATTACAGATATTGCAGCCCAGAATACTCTTTTCCGTCTCAGCAAGAGGTTATCCAGTTTGCCATCAACATTGCCTTTGAGACTGTAACTCTAAACCCACGTGCTCTTGTTGTCTGTGGCACTTATTCTATTGGAAAAGAGAAAGTCTTCCTAGCCATTGCTGATGTTTTAGGTTCAAAAGTGGGCATGTCCAAAGAAAAATATAACACATTACAGTGCTTCAATATACCAGAAATTAATTCCCTCATCACTACAGACATRTGCAATTCACTGGTTCACCTTCTCCCAATGATGCAAATTAATTTTAAGGGTTTACAGAATCATTTGAAGAAGTGTGGTGGGAAATATGATCAGATTTTGGCTTTTCGACCTACAGGATGGACGCATTCTAACAAGTTAACTAGTATGGCGGATATTATTCCCCAGACCAAAGGAAACATTTCAATATATGGGATTCCCTATAGTGAACACAGCAGCTACCCAGAGATGAAACGTTTTGTTCAATGGCTGAAGCCGCAGAAAATCATACCTACYGTGAATGTTGGCACCTTGAGATCCAGGCGCRCAATGGAGAAATATTTTAAAGAGTGGAAGTTGGAAGCTGGATATTGA

Related Sequences

bmy_03051T0 Protein

Length: 1177 aa      View alignments
>bmy_03051T0
MCPPFTNPRSAADADAAAAWGQRLGWAKRLCPARRQNHASPTASGEGAVPEEGEVPGGVPTPKPAPHLPETRALTSPAPSRPPSADTDQAVLLLLGDGVEQSVLQRGLSREQAREAAAPGSGRRHVLSGRSRGGRRARGTVSFGERRTYGPLVSKPHIRLTLHQPHATLTALFSNAKVQIDAIPRHVIKLPSQPTPPLLNLLAAAEPGHSEHQIQHGKGFWASARISRFDTALGKRSCSRHGTKEDAFLEQXIWEYKSKRKPKPVHPNNCSENIPKSVEKATDGQYQSKRNRNKKRTVEGKKKVKAPETCLGETDSQTSVASSQNSSCGDGIQQCQDREATPGKHCRTHKNKHVSPKIRPVYDGYCPNCQMPFSSLLGQTPRWHVFECLDSIPVSETECPDALQCSSTIPSHYKRYTHLLLAQSRASNSPFSDPSHESVTQCLRKSQSPTETDKKVSSXTNIQTSQQVPQFTELVNDDKLVGFGLPLAEELDSQNSPEHXNLTLPENDFSNCEISYSPLQSDEETYDTGEKLDDSQQELFFTESSKDGSLEDENSSTLSKKLHDPLLKBQEESCPEMDSFLTQDKYDEELYKCXTLNDSSQLTFQSKSVILRDDPAYTDDDFILSPPALAERFTSPSYQATKAKPDEPEFHSSQSNKEKQVIEESAVYNQISLPLLKSKMSKPFESQGGGCHSFQPTQSKTRELSSKNFNAKHNTNAACFCRRALDGMLDSKVTAVNTAIFSSTPTXAKSLKILPSGPKCNASQPSTKVMKQMDIGVYFGLPPKRKEEKLLVESXLEGMNLNTVVSPNEKRSRQCKRKREKSLSDLELEANNLSESQPSVELSRKRSQHQRKRLKKSDSLQEGVHQKSSGHRNKTEPGTVKLRKDRVFIKSAHGRLQRGNTKIPESSNAGELRKRTCPFYKKIPGAVMILFYLPNGYVILHTGDFRADPTMERSLLAGQKVHTLYLDTTTIFPYYRYCSPEYSFPSQQEVIQFAINIAFETVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLQCFNIPEINSLITTDXCNSLVHLLPMMQINFKGLQNHLKKCGGKYDQILAFRPTGWTHSNKLTSMADIIPQTKGNISIYGIPYSEHSSYPEMKRFVQWLKPQKIIPTVNVGTLRSRRXMEKYFKEWKLEAGY*