Part of scaffold_87 (Scaffold)

For more information consult the page for scaffold_87 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HABP2 ENSTTRG00000011946 (Bottlenosed dolphin)

Gene Details

hyaluronan binding protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011333, Bottlenosed dolphin)

Protein Percentage 86.65%
cDNA percentage 90.07%
Ka/Ks Ratio 0.45833 (Ka = 0.0879, Ks = 0.1918)

HABP2 ENSBTAG00000019322 (Cow)

Gene Details

Hyaluronan-binding protein 2 Hyaluronan-binding protein 2 50 kDa heavy chain Hyaluronan-binding protein 2 50 kDa heavy chain alternate form Hyaluronan-binding protein 2 27 kDa light chain Hyaluronan-binding protein 2 27 kDa light chain alternate form

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025732, Cow)

Protein Percentage 80.5%
cDNA percentage 84.77%
Ka/Ks Ratio 0.31705 (Ka = 0.1227, Ks = 0.3869)

HABP2  (Minke Whale)

Gene Details

hyaluronan binding protein 2

External Links

Gene match (Identifier: BACU019884, Minke Whale)

Protein Percentage 97.72%
cDNA percentage 98.41%
Ka/Ks Ratio 0.33416 (Ka = 0.0107, Ks = 0.0319)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1656 bp    Location:881656..896376   Strand:+
>bmy_03046
ATGATTCTTAATGGTCTAACCAAGATTATCCAGTCTGAACCTCGACTTGTGGGAGTGATGGGAGAAATTACAGGAGCAATTCGAAGGCGCTTATCTATAAACACCTATTGGACTCTCGACCACTATGAGTACAGCCAAGAGTATTATGACCAGGAAGAGAATGCCAGCAGTGCTCTTGCCCATCCCGAGAACCCTGACTGGTACTACGCAGAGGACGGTCGGAGATGGAAATTCAATGAGCAGACAGGGGGCTTCTTGCCTGCTGTTCATTGCAACATTGACTTCCGCCCACGTGTTTTAGATCCGTGCCTGTCCAACCCCTGTGCACATGGTGGGGACTGCCTCATCAGCGGGGCCACATTCACCTGCAGCTGTCCAGCCCCTTTCTCTGGAAACAGGTGTCAGAATGTGCAAAACAAATGCAAGAACAACCCATGTGGCCGAGGAGACTGTCTCATTACTCAGAGTTCTCCTTACTACCGCTGTGCCTGTAAACACCCTTACAGGGGTGCAGACTGCTCCACAGTGGTTCCTGCATGTAGGCCAAATCCCTGCCAAAATGGCGGCACCTGCTCCCGGCATAGGCGGAGATCCAAGTTCACCTGTACCTGTCCTGACCAGTTCAAGGGGAGACTCTGTGAAATAGGTTCTGATGACTGCTATGTTGGTGATGGCTACTCTTACCGAGGGAAAGTGAGTAAGACAGTCAACCAGCACTCATGCCTTTACTGGAACTCCCATCTCCTCTTGAAGGAGAATTACAACACGTTTATGGAGGATGCTGAGGCCCATGGGATTGGGGAGCACAACTTCTGCAGAAACCCAGATGGAGACAAAAAGCCCTGGTGTTTCTTTAAAGTAAACAATGCAAAGGTGAAATGGGAGTACTGTGATGTCCCCGCCTGCTCAGAACTAGATGTTGCCTACCCAGAGGGAAGCCTCACGGAGCCCCTGACCAAACTTCCCGAGTTTGACTCATGCGGGAGGACTGAGATAGCAGAGAGGAAGGTCAAGAGGATCTACGGCGGCTTTAAGAGCACAGCGGGCAAGCACCCATGGCAGGCGTCCCTGCAGACCTCGTTGCGACTGACCGTCTCCATGCCCCAGGGCCATTTCTGTGGGGGGACACTGATCCACCCCTGCTGGGTGCTGACTGCCGCCCACTGCACCGAAGAGGATATCACTGCCCGTTTCCCCTTTCTCTACCTAGCTTTGCTCAAGCTAAAGCCAGTGGATGGTCACTGTGCTCTGGAATCCAAATATGTGAAAACTGTATGTTTGCCTGATGGTCCCTTTCCCCCTGGGACTGAGTGTCACATCTCCGGCTGGGGTGTTACAGAAACAGGAGAAGGGTCCCACCAGCTCCTGGATGCCAAAGTCAAGCTGATCAACAACACCATGTGCAACTCCCGCCAACTATATGACCACATGATCGATGACAGTATGATTTGTGCAGGAAACCTCCAGAAGCCTGGGCAAGACTCCTGCCAGGGTGACTCTGGAGGCCCTCTGACCTGTGAGAAGGACGGTACCTACTACGTCTATGGGATCGTGAGCTGGGGCCTGGAGTGTGGGAAGAAGCCAGGAGTCTACACCCAAGTGACCAAATTCCTGACTTGGATCAAAGCCACCATGCAAAGGGAGGCTAGCTTTTGA

Related Sequences

bmy_03046T0 Protein

Length: 552 aa      View alignments
>bmy_03046T0
MILNGLTKIIQSEPRLVGVMGEITGAIRRRLSINTYWTLDHYEYSQEYYDQEENASSALAHPENPDWYYAEDGRRWKFNEQTGGFLPAVHCNIDFRPRVLDPCLSNPCAHGGDCLISGATFTCSCPAPFSGNRCQNVQNKCKNNPCGRGDCLITQSSPYYRCACKHPYRGADCSTVVPACRPNPCQNGGTCSRHRRRSKFTCTCPDQFKGRLCEIGSDDCYVGDGYSYRGKVSKTVNQHSCLYWNSHLLLKENYNTFMEDAEAHGIGEHNFCRNPDGDKKPWCFFKVNNAKVKWEYCDVPACSELDVAYPEGSLTEPLTKLPEFDSCGRTEIAERKVKRIYGGFKSTAGKHPWQASLQTSLRLTVSMPQGHFCGGTLIHPCWVLTAAHCTEEDITARFPFLYLALLKLKPVDGHCALESKYVKTVCLPDGPFPPGTECHISGWGVTETGEGSHQLLDAKVKLINNTMCNSRQLYDHMIDDSMICAGNLQKPGQDSCQGDSGGPLTCEKDGTYYVYGIVSWGLECGKKPGVYTQVTKFLTWIKATMQREASF*