Part of scaffold_87 (Scaffold)

For more information consult the page for scaffold_87 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCF7L2 ENSTTRG00000002360 (Bottlenosed dolphin)

Gene Details

transcription factor 7-like 2 (T-cell specific, HMG-box)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002212, Bottlenosed dolphin)

Protein Percentage 86.41%
cDNA percentage 86.27%
Ka/Ks Ratio 0.27481 (Ka = 0.0202, Ks = 0.0735)

TCFL2 ENSBTAG00000021574 (Cow)

Gene Details

transcription factor 7-like 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054093, Cow)

Protein Percentage 86.62%
cDNA percentage 86.62%
Ka/Ks Ratio 0.35068 (Ka = 0.1039, Ks = 0.2962)

TCF7L2  (Minke Whale)

Gene Details

transcription factor 7-like 2 (T-cell specific, HMG-box)

External Links

Gene match (Identifier: BACU004658, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.43%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0154)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1350 bp    Location:508400..533747   Strand:+
>bmy_03045
ATGAAAAAGTTAGAAGCGCCTTTTAAAATGCCCTCCCCACAATTAACTGTGCGACTCTTCCCAAACTCGAACAAAGTGCCGGTTGTGCAACACCCCCACCATGTCCACCCTCTCACGCCTCTTATCACATACAGCAATGAACACTTCACGCCGGGAAACCCACCTCCACACTTACCAGCTGACGTAGACCCCAAAACAGGAATCCCACGGCCTCCGCACCCTCCAGATATATCTCCGTATTACCCGCTATCGCCCGGCACTGTAGGACAAATCCCCCATCCGCTAGGATGGCAAGGTCAGCCAGTGTACCCAATCACGACMGGAGGATTCCGTCACCCCTACCCCACAGCTCTGACTGTCAACGCTTCCATGTCCAGGTTCCCTCCCCATATGGTCCCACCACATCATACTCTACACACGACCGGCATTCCCCACCCGGCCATAGTCACGCCGACAGTCAAACAGGAATCTTCCCAGAGTGACGTYGGCTCACTCCACAGCGCAAAGCATCAGGACTCCAAAAAGGAAGAAGAAAAGAAGAAGCCCCACATAAAGAAACCTCTTAACGCATTCATGTTGTATATGAAGGAAATGAGAGCGAAGGTTGTAGCCGAGTGCACATTGAAAGAAAGTGCAGCCATCAACCAGATCCTGGGCCGAAGGTGGCACGCACTGTCCAGAGAAGAGCAAGCCAAATACTACGAGCTGGCCCGGAAGGAGCGACAGCTTCACATGCAGCTGTACCCCGGCTGGTCCGCACGGGATAACTATGGGAAGAAGAAGAAGAGGAAAAGGGACAAGCAGCCCGGGGAGACCAATGAACACAGCGAATGTTTCCTAAATCCTTGCCTTTCACTTCCTCCGATTACAGACCTGAGCGCTCCTAAGAAATGCCGAGCGCGCTTTGGCCTTGATCAACAGAATAACTGGTGCGGCCCTTGCAGGAGAAAAAAAAAGTGCGTTCGCTACATACAAGGTGAAGGCAGCTGCCTCAGTCCACCCTCTTCAGATGGAAGCTTACTAGACTCGCCTCCTTCCTCCCCCAACCTGCTAGGCTCCCCTCCCCAAGACGCCAAGTCACAGACTGAGCAGACCCAGCCTCTCTCGCTGTCCCTGAAGCCCGACCCCCTGGCCCACCTGCCCATGATGCCTCCGCCGCCCGCCCTCCTGCTTGCCGAGGCCGCCCACGGCAAGGCCCCCGCCCTCTGTGCCAACGGGGCCCTGGACCTGCCTCCCGCCATCCCTCCCTCATCTCTGGCGCAGCCGTCGACATCTTCCTTACATTCCCACGGCTCTCTGGCCGGGACGCAGCCGCAGCCGCTCTCCCTCGTCACCAAGTCTTTAGAATAG

Related Sequences

bmy_03045T0 Protein

Length: 450 aa      View alignments
>bmy_03045T0
MKKLEAPFKMPSPQLTVRLFPNSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSAKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNEHSECFLNPCLSLPPITDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPSSPNLLGSPPQDAKSQTEQTQPLSLSLKPDPLAHLPMMPPPPALLLAEAAHGKAPALCANGALDLPPAIPPSSLAQPSTSSLHSHGSLAGTQPQPLSLVTKSLE*