Part of scaffold_89 (Scaffold)

For more information consult the page for scaffold_89 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPD52L3 ENSTTRG00000016528 (Bottlenosed dolphin)

Gene Details

tumor protein D52-like 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015669, Bottlenosed dolphin)

Protein Percentage 86.92%
cDNA percentage 92.31%
Ka/Ks Ratio 1.05354 (Ka = 0.0843, Ks = 0.08)

BT.59526 ENSBTAG00000011160 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014821, Cow)

Protein Percentage 78.15%
cDNA percentage 86.53%
Ka/Ks Ratio 0.6742 (Ka = 0.1355, Ks = 0.201)

TPD52L3  (Minke Whale)

Gene Details

tumor protein D52-like 3

External Links

Gene match (Identifier: BACU011675, Minke Whale)

Protein Percentage 94.96%
cDNA percentage 97.6%
Ka/Ks Ratio 0.94714 (Ka = 0.0243, Ks = 0.0257)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:1442428..1434839   Strand:-
>bmy_03018
ATGGATCCGTCCCACCCCACCCTACAGTCTGACCCCGAAGGCCTAGACTTCGACTCTGCTGGCCAAGACTACTTTTCCTCTGGCCATGAGTTCGACTATCTCTTCCAAGAATTGGACCTGGACTCTCTTCATGAAGATCTTCTTTCTCAGTCTATGCCAGGCGCCATGATAGAGACCTCTGCAGCCACGTATGACTCCCACCGGACTGCCGAACCAGAGGATCTCACAGAGGCGGAGAAAAAGGAGCTCAAATCTGAGCTTGGTAAATTGGAGGCAGAAATTGTAACCCTACGCTGTGCGCTGGCAGCCAAAGAGAGACGCTGCGTGGAGCTCAAGAGGAAGTTGGACCTGACGGCCTTGGTGGGGCTGAGGCAGAATCTGTCCAAGAGCTGGCACGATGCTCAGGTCTCCAAAGCCTACAAGAAACAAAAGACGTCAGCTGCCCTGTCCACCACGGGCTCTGCCATCTGCAGGAAGCTTGGAGACATGAAGAAATCGGCCACATTTAGATCCTTTGAAGCTCAGGCAGAATTGGTGGTGATCTGA

Related Sequences

bmy_03018T0 Protein

Length: 182 aa      View alignments
>bmy_03018T0
MDPSHPTLQSDPEGLDFDSAGQDYFSSGHEFDYLFQELDLDSLHEDLLSQSMPGAMIETSAATYDSHRTAEPEDLTEAEKKELKSELGKLEAEIVTLRCALAAKERRCVELKRKLDLTALVGLRQNLSKSWHDAQVSKAYKKQKTSAALSTTGSAICRKLGDMKKSATFRSFEAQAELVVI*