Part of scaffold_84 (Scaffold)

For more information consult the page for scaffold_84 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCT4 ENSTTRG00000017167 (Bottlenosed dolphin)

Gene Details

chaperonin containing TCP1, subunit 4 (delta)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016271, Bottlenosed dolphin)

Protein Percentage 89.12%
cDNA percentage 89.97%
Ka/Ks Ratio 0.39363 (Ka = 0.0151, Ks = 0.0383)

CCT4 ENSBTAG00000004531 (Cow)

Gene Details

T-complex protein 1 subunit delta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042274, Cow)

Protein Percentage 98.33%
cDNA percentage 96.1%
Ka/Ks Ratio 0.0652 (Ka = 0.0087, Ks = 0.1337)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1785 bp    Location:551715..566530   Strand:+
>bmy_02993
GCCGGGCCTCCAGGCAGGCCCCTTTCCCCGCCTCCTCCTCCCGGCGCCGGTGCCGCTTTCTGGAAGCTTCGAGAAGGCGGTGGGCGCTTACTGTTAGTCCCGGGCCAGCCGGAATCCGTGTCCATCCGTCCTTCCAGAGCTCACGCAGACCCGTCCAAGCTTGCCATGCCGGAGAACGTAGCCCCCCGGAGCGGGCCGCCCGCCGGGCTTGCCGGCGGCCGCGGGAGGAGCGCCTATCAGGACCGCGATAAGCCGGCCCAGATCCGCTTCAGCAACATCTCCGCGGCCAAAGCTGTTGCTGATGCTATTAGAACAAGCCTTGGACCGAAAGGAATGGATAAAATGATTCAAGATGGAAAAGGTGATGTGACCATTACAAATGATGGTGCCACCATTCTGAAACAAATGCAGGTGTTACATCCAGCAGCCAGAATGCTGGTGGAGCTATCTAAGGCTCAGGATATAGAAGCGGGAGATGGCACGACATCAGTGGTCATTATTGCTGGCTCTCTCTTAGATTCCTGTACCAAGCTTCTTCAGAAAGGGATTCATCCCACCATCATTTCTGAGTCATTCCAGAAGGCTTTGGAAAAGGGTATTGAAGTCTTGACTGACATGTCTCGACCTGTGGAACTGAGTGACAGAGAAACTTTGTTAAATAGTGCAGCCACTTCATTGAACTCAAAGGTTGTCTCTCAATATTCAAGTCTCCTTTCTCCAATGACTGTAAATGCAGTGATGAAAGTGATTGACCCAGCCACAGCTACTAGTGTAGATCTTAGAGATGTTAAAATAGTTAAGAAACTTGGTGGGACAATTGATGACTGTGAGTTGGTGGAAGGTCTGGTTCTTACTCAAAAGGTGGCAAATTCTGGCATAACCAGGGTTGAAAAGGCTAAGATTGGGCTTATTCAGTTCTGCTTATCTGCTCCCAAAACAGATATGGACAATCAAATAGTAGTTTCTGACTACGTCCAGATGGACCGAGTGCTACGAGAGGAGAGAGCCTATATTCTAAATTTAGTGAAGCAAATTAAGAAAACAGGATGTAATGTTCTTCTCATACAGAAGTCTATTCTAAGAGATGCTCTTAGTGATCTTGCATTACATTTCCTGAACAAAATGAAGATTATGGTGGTTAAGGATATTGAAAGAGAAGACATTGAATTCATTTGTAAGACTATTGGAACCAAACCAGTTGCTCATGTTGACCAGTTCACTGCTGACATGCTGGGATCGGCTGAGTTAGCTGAGGAGGTCAGCTTAAATGGTTCTGGCAAACTGATCAAGATTACAGGCTGTGCAAGCCCTGGGAAAACAGTTACAATCGTTGTTCGTGGTTCTAACAAATTGGTGATTGAAGAAGCTGAGCGTTCCATTCATGATGCCCTATGTGTTATTCGCTGTTTAGTGAAGAAGAGGGCTCTTATTGCAGGAGGTGGTGCTCCAGAAATAGAGTTGGCCCTGCGATTAACTGAATACTCAAGAACATTGAGTGGTATGGAATCCTACTGCGTTCGTGCTTTTGCAGATGCTATGGAGGTCATTCCATCTACACTAGCTGAAAATGCTGGCCTGAATCCCATTTCTACAGTAACAGAACTAAGAAACAGGCATGCCCAAGGAGAAAAAACTACAGGCATTAATGTCCGAAAGGGTGGTATTTCCAACATACTGGAGGAACTGGTTGTCCAGCCTCTGTTGGTTTCAGTCAGTGCACTGACTCTAGCAACTGAAACTGTCCGGAGCATTCTGAAAATTGATGATGTGGTAAACAGTCGGTAA

Related Sequences

bmy_02993T0 Protein

Length: 595 aa      View alignments
>bmy_02993T0
AGPPGRPLSPPPPPGAGAAFWKLREGGGRLLLVPGQPESVSIRPSRAHADPSKLAMPENVAPRSGPPAGLAGGRGRSAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEVLTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMTVNAVMKVIDPATATSVDLRDVKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNSR*