Part of scaffold_85 (Scaffold)

For more information consult the page for scaffold_85 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDZRN3 ENSTTRG00000002919 (Bottlenosed dolphin)

Gene Details

PDZ domain containing ring finger 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002738, Bottlenosed dolphin)

Protein Percentage 98.51%
cDNA percentage 98.14%
Ka/Ks Ratio 0.04508 (Ka = 0.0057, Ks = 0.1254)

PDZRN3 ENSBTAG00000018644 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024807, Cow)

Protein Percentage 96.21%
cDNA percentage 93.79%
Ka/Ks Ratio 0.03022 (Ka = 0.0154, Ks = 0.5111)

PDZRN3  (Minke Whale)

Gene Details

PDZ domain containing ring finger 3

External Links

Gene match (Identifier: BACU015126, Minke Whale)

Protein Percentage 99.22%
cDNA percentage 98.91%
Ka/Ks Ratio 0.04541 (Ka = 0.003, Ks = 0.0657)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1932 bp    Location:125528..117131   Strand:-
>bmy_02949
ATGAACAGCCAGGACAAGCTGGGCCTCACAGTATGCTACCGGACGGACGATGAAGATGACATTGGGATTTACATAAGCGAGATCGACCCTAACAGCATCGCGGCCAAGGATGGGCGCATCCGAGAAGGAGACCGCATCATCCAGATTAACGGGATAGAGGTACAGAACCGCGAAGAGGCCGTGGCTCTTCTAACCAGTGAAGACAACAAGAACTTTTCCTTGCTAATTGCGAGGCCCGAACTCCAGCTGGACGAGGGCTGGATGGATGACGACAGAAACGACTTTCTGGACGACCTGCACATGGACATGCTGGAGGAGCAGCACCAGCAGGCCATGCGGTTCACCGCCGGCGCGCTGCAGCAGAARAAGCACGAGGAAGACGGGGGAACCACAGACACGGCCACCATCCTGTCCAACCAGCACGAGAAGGACAGCGGCGTGGGCCGGACGGACGAGAGCACGCGCAACGACGAGAGCTCAGAGCAGGAGAACAACGGCGACGACGCCCCCGCGGCCTCCCCGCCGCTGGCCGGGCAGAGGAAGCTCACGTGCAGCCAGGACACCCTGGGCAGCGGCGACCTGCCCTTCAGCAACGAGTCCTTCATCTCGGCCGACTGCGCCGACGCCGACTACCTGGGCATCCCGGTGGACGAGTGCGAGCGCTTCCGCGAGCTGCTGGAGCTCAAGTGCCAGGTGAAGAGTGCCAGCCCTTACGGCCTGTACTACCCGGGCAGCCCCCTGGACGCCAGCAAGAGCGACCCGGAGAGCGTGGACAAGGAGCTGGAGCTGCTCAACGAGGAGCTGCGCAGCATCGAGCTGGAGTGCCTCAGCATCGTGCGCGCGCACAAGATGCAGCAGCTCAAGGAGCAGTACCGCGAGCCCTGGATGCTGCACAACAGCGGCTTCCGCAACTACAACACCAGCGTCGACGTGCGCAGGCGCGAGCTCTCGGACATCACCGAGCTCCCCGAGAAGTCCGACAAAGACAGCTCGAGCGCCTACAACACCGGCGAGAGCTGCCGGAGCACCCCGCTCACCTTGGAGATGTCCCCCGACAACTCCCTGAGGAGAGCGGCCGAGGGCGTCGGCGGTCCCGGCAGTGAAGGCGCCGCGGGGACCGCCGAGGCGTACGGGCCGTCCCCAAAGAATCTGCTCTCCATCACGGAAGATCCCGAAGTGGGCTCCCCGGACTACAGCCCTTCCCCTGAAGAGCTGGACCCCAGCCAGGCCCTGGAGGGCAAGGAGAGGAAACCCAGCGACGGCAGCGGGAGCCCCACCCCCAGCCAGAAGCTGGGCGGAGGCTCGTACCTGTCGCCCTTCCCGCACTCCCCCTACAAACACGCCCACATCCCGGCGCACGCGCAGCACTACCAGAGCTACATGCAGCTGATCCAGCAGAAGTCGGCCGTGGAGTACGCGCAAAGCCAGATGAGCCTGGTGAGCATGTGCAAGGACCTGAACTCTGCCAACCAGTCGGAGCCGAGAATGGAGTGGAAAGTGAAGATCCGGAGCGACGGGACGCGCTACATCACCAAGCGGCCGGTGCGGGATCGCCTGCTGCGGGAGCGCGCGCTCAAGATCCGCGAGGAGCGCAGCGGCATGACCACGGACGACGATGCGGTGAGCGAGCTGAAGATGGGGCGGTACTGGAGCAAGGAGGAGAGGAAGCAGCACGTGGTGAAGGCCAAGGAGCAGAGGCGGAGGCGCGAGTTCATGATGCAGAGCCGGCTCGACTGCCTGAAGGAGCAGCAAGGGGCCGACGACAGGAAGGAGATGAACATCCTGGAACTCAGCCACAAAAAGATGATGAAGAAGAGGAATAAAAAGATATTTGATAACTGGATGACGATCCAAGAACTCTTAACCCACGGCACGAAATCTCCAGACGGCACTAGAGTATACAATTCGTTCCTATCGGTGACTACTGTATAA

Related Sequences

bmy_02949T0 Protein

Length: 644 aa      View alignments
>bmy_02949T0
MNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEDNKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHQQAMRFTAGALQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPLAGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSASPYGLYYPGSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYREPWMLHNSGFRNYNTSVDVRRRELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLRRAAEGVGGPGSEGAAGTAEAYGPSPKNLLSITEDPEVGSPDYSPSPEELDPSQALEGKERKPSDGSGSPTPSQKLGGGSYLSPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVSELKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNILELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV*