Part of scaffold_82 (Scaffold)

For more information consult the page for scaffold_82 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPN1 ENSTTRG00000014277 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, non-receptor type 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013532, Bottlenosed dolphin)

Protein Percentage 96.92%
cDNA percentage 97.63%
Ka/Ks Ratio 0.25634 (Ka = 0.0142, Ks = 0.0553)

PTPN1 ENSBTAG00000006616 (Cow)

Gene Details

tyrosine-protein phosphatase non-receptor type 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008678, Cow)

Protein Percentage 93.6%
cDNA percentage 91.86%
Ka/Ks Ratio 0.12312 (Ka = 0.0337, Ks = 0.2741)

PTPN1  (Minke Whale)

Gene Details

protein tyrosine phosphatase, non-receptor type 1

External Links

Gene match (Identifier: BACU020189, Minke Whale)

Protein Percentage 99.25%
cDNA percentage 99.33%
Ka/Ks Ratio 0.22205 (Ka = 0.0035, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location:1633740..1698886   Strand:+
>bmy_02942
ATGGAGATGGAAAAGGAGTTCGAGCAGATCGACAAGGCTGGGAGCTGGGCGGCCATTTACCAGGATATCCGACACGAAGCCAGTGACTTCCCATGTAGAGTGGCCAAGCTTCCTAAGAACAAAAACCGAAACAGGTACAGAGATGTCAGTCCCTTTGACCATAGTCGGATTAAACTTCATCAAGAAGATAACGACTATATCAATGCTAGTTTGATAAAAATGGAAGAAGCCCAAAGGAGTTACATTCTCACGCAGGGCCCTTTGCCCAATACCTGCGGTCACTTTTGGGAGATGGTGTGGGAGCAGAAAAGCAGGGGCGTTGTCATGCTCAACAGAGTGATGGAGAAAGGCTCGTTAAAATGTGCACAGTACTGGCCACAAAAAGAAGAAGAAGAAATGATCTTTGAAGACACAAATTTGAAATTGACATTGGTCTCTGAAGATATTAAGTCATATTACACAGTACGACAACTAGAATTGGAAAACCTCACATCTCAAGAAACTCGAGAGATCCTACATTTCCACTATACCACGTGGCCTGACTTTGGAGTCCCTGAATCGCCAGCCTCGTTTCTGAACTTTCTTTTCAAAGTCCGCGAGTCGGGGTCGCTCAGCACGGAGTATGGCCCCATTGTGGTGCACTGCAGCGCTGGCATCGGCAGGTCGGGGACCTTCTGTCTGGCTGACACCTGCCTCTTGCTGATGGACAAAAGGAAAGACCCTTCTTCTGTTGATATCAAGAAAGTTCTGTTAGAAATGCGGAAATTTCGGATGGGACTGATCCAGACAGCAGACCAGCTCCGTTTCTCCTACCTGGCTGTGATCGAAGGCGCCAAGTTCATCATGGGAGACTCTTCAGTACAGGAACAATGGAAAGAGCTCTCCCACGAGGACCTGGAGCCTCCACCCGAGCACATCCCCCCACCTCCCCGGCCTCCCAAACGAATCCTGGAGCCACACAATGGGAAGTGCAAGGAGTTCTTCCCAAACCACCAGTGGGTGAAGGATGAGACTGAGGAGGTTAAAGAAGATGGCCCCATCAAGGAAGAAACCAGAACCCTCTTGAACGTCCCCTGCAGCCTGGAAAGCGCGAGTCAAGACACTGAAGTCAGAAGGCGGGTCGTGGGGGCAGGTCCTGCCCAGGGGGAGCCGTCGCCGTCCAAGGAGGAGCAGGACCAGGCGCCGACTCACTGGAAGCCCTTCCTGGTCAACGTGTGCGTGGCCACGGTCCTCACGGCCGGCGCGTACCTCTGCTACAGGGTGGTGTAA

Related Sequences

bmy_02942T0 Protein

Length: 423 aa      View alignments
>bmy_02942T0
MEMEKEFEQIDKAGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEEEMIFEDTNLKLTLVSEDIKSYYTVRQLELENLTSQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSTEYGPIVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQEQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCKEFFPNHQWVKDETEEVKEDGPIKEETRTLLNVPCSLESASQDTEVRRRVVGAGPAQGEPSPSKEEQDQAPTHWKPFLVNVCVATVLTAGAYLCYRVV*