Sequence details bmy_01591 (Coding sequence)

Part of scaffold_40 (Scaffold)

For more information consult the page for scaffold_40 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMTN ENSTTRG00000010248 (Bottlenosed dolphin)

Gene Details

smoothelin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009724, Bottlenosed dolphin)

Protein Percentage 93.18%
cDNA percentage 95.81%
Ka/Ks Ratio 0.68541 (Ka = 0.0385, Ks = 0.0562)

SMTN ENSBTAG00000003100 (Cow)

Gene Details

smoothelin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004034, Cow)

Protein Percentage 87.73%
cDNA percentage 89.07%
Ka/Ks Ratio 0.26644 (Ka = 0.072, Ks = 0.2701)

SMTN  (Minke Whale)

Gene Details

smoothelin

External Links

Gene match (Identifier: BACU003321, Minke Whale)

Protein Percentage 90.91%
cDNA percentage 93.04%
Ka/Ks Ratio 0.8424 (Ka = 0.0705, Ks = 0.0837)

Additional orthologs identified in other species via the OPTIC pipeline.

SMTN (Human)   Smtn (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1962 bp    Location:798036..775809   Strand:-
Raw sequence 
>bmy_01591
ATGGGGCACGAGGGTGGGCGGGACCCTCCCCAGGATTGGTTGGCGCCGTGGCGCGGGGCGGGGCCGGCGGGGCTGCTGGCGCGGCTGGACGGGCGGCGCTTGCAGAATCCCGGGGACGAATTCCCTGAGCTGGTGTCAGCTTCCAAAGGCACTGGGGAACTCACCAGGAGGGGACGGACGGAGCTAGGGGCCAGCAAGATGGCGGACGAAACATTAGCTGGGCTGGATGAGGGAGCTTTGCGGAAGCTGCTGGAGGTCACAGCAGATCTGGCAGAGCGGCGGCGCATCCGCTCAGCCATCCGGGAGCTGCAGCGGCAGGAGCTGGAGCGCGAGGAGGAGGCCCTGGCATCCAAGCGCTTCCGTGCCGAGCGGCAGGACAACAAGGAGAACTGGCTGCACTCTCAGCAGCGGGAGGCTGAGCAGCGGGCTGCTCTGGCACGGCTGGCAGGACGTCTGGAGTCCATGAGTGATGTGGAGGAGCTGACCACACTGCTGCGAGGCGCTGCTGAGTACGAGGAACGCAAGCTGATCCGAGCCGCTATCCGCCGCGTACGGGCCCAGGAGATTGAGGCCGCCACATTGGCTGGAAGGTTGTGCAGCGGGCGTCCCAACAGTGGCTCAAGAGAGGACAGCAAGGGGCGGGCAGCACACAGGCTGAACCGGTGTGAGGTGCCGAAGCCAGAGGAACAGGAGCAGCAGGCAGAGGTCCCAGAGCCAACCCCGACCCCCAGTGGCACCAGCTATGACGTGACCACAGTGACACTACTGCTTCGGGCCCCACCTGGGGGCACACCCAGCTCACCTGCCTCAGCCGACAGTTCACCCACCACTACCTCTCCTGAGCCTCCACTGGAGCCTGCCGAGGCCCCATGCCCTGCCACTGAGGCTCTGGGCAGCCCCGAGCCACCTCCCAGCCCGCCCAGGGCTGCCAGCCCTGAGCCCCAGGAGCCTCCAGCCACCCCCAGCACGGAGGGGCAGGTGGTCAACAAGCTCCTGCGTGGCCCCACAGAGCCCCCTGCTGCCCACGGCCCTACCAAAGGTCCCTCCGACACAAAGAGAGCAGGTGTGGAAGAGAGGACTATGAGAGGTGGACCCCACCATCCACTCCTCTCTCTGCTCCCACATGGCCGCCACCGCCTTCCCATGCTGCCAGACCTAGCTGGCCCTCGCCCCTGCCAACGCTCCCTGTCTGTGCTGAGCCCCCGCCAGCCAGTCCAGAACCGAGAGCCCACCCCCCTTGCCAGCGGACCTTCCCCGTTCCGGCGGGCTGGCTCCGTACGGGACCGTGTGCGCAAGTTCACATCCGATTCTCCTATGGCTGCTGGGCTCCAGGAAGGCCCACTCCGGGCAGCCCTAGGTCCCTCGACCCCTGGAAGGCTCCCAGGCTCCTCCCACATCAGCACCACCCCTGCCTCCTCCTCCAGTGGCCCCTCCTCACGGGGCCCCAGTGACACCTCCTCCCAGTTCAACAAGGATCAGCGAGGAACAGCCCGGCCCCTGGCCCAGCTTCAGAGCTGCCCCAGGGAGGAGGGCCCCAGGGGGCGGGGCTTGGCTGTCAGGCCCCTTGAAAACAGAGCAGGGGGGCCCATGGCCCGCTCAGAGGCGCCCAGTGCCCCGCTAGCCGTGGCCGTGGGCACTGCTGAGCCAGGGGCCAGTATGAAGACCACATTCACCATCGAGATCAAGGATGGCCGGGGCCAGGCCTCCACGGGCCGGGTGCTGCTGCCCACAGGCAACCAGAGGGCAGAACTGACGCTGGGGCTGCGGGCGCCCCCCACCCTCCTTAGCACCAGCAGTGGGGGCAAGAGCACCATCACCCATATCAGCAGCCCTGGGAACCTGGCTCGGCTGGGCAGTGTCACTCACGTCACCAGCTTCAGCCATGCCTCCCCTGCTGCAAAGACTGACTGCCAGACAGAAGCAGCAGTCCCTACCACTGCCCCCTTCGTCACCCCACCGTAG

Related Sequences

bmy_01591T0 Protein

Length: 654 aa      View alignments
>bmy_01591T0
MGHEGGRDPPQDWLAPWRGAGPAGLLARLDGRRLQNPGDEFPELVSASKGTGELTRRGRTELGASKMADETLAGLDEGALRKLLEVTADLAERRRIRSAIRELQRQELEREEEALASKRFRAERQDNKENWLHSQQREAEQRAALARLAGRLESMSDVEELTTLLRGAAEYEERKLIRAAIRRVRAQEIEAATLAGRLCSGRPNSGSREDSKGRAAHRLNRCEVPKPEEQEQQAEVPEPTPTPSGTSYDVTTVTLLLRAPPGGTPSSPASADSSPTTTSPEPPLEPAEAPCPATEALGSPEPPPSPPRAASPEPQEPPATPSTEGQVVNKLLRGPTEPPAAHGPTKGPSDTKRAGVEERTMRGGPHHPLLSLLPHGRHRLPMLPDLAGPRPCQRSLSVLSPRQPVQNREPTPLASGPSPFRRAGSVRDRVRKFTSDSPMAAGLQEGPLRAALGPSTPGRLPGSSHISTTPASSSSGPSSRGPSDTSSQFNKDQRGTARPLAQLQSCPREEGPRGRGLAVRPLENRAGGPMARSEAPSAPLAVAVGTAEPGASMKTTFTIEIKDGRGQASTGRVLLPTGNQRAELTLGLRAPPTLLSTSSGGKSTITHISSPGNLARLGSVTHVTSFSHASPAAKTDCQTEAAVPTTAPFVTPP*