Sequence detailsbmy_01514 (Coding sequence)

Part of scaffold_36 (SequenceType object (1))

For more information consult the page for scaffold_36 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX33ENSBTAG00000012206 (Cow)

Gene Details

sorting nexin-33

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016186, Cow)

Protein Percentage 96.67%
cDNA percentage 94.16%
Ka/Ks Ratio 0.04323 (Ka = 0.0152, Ks = 0.3517)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX33 (Human)   Snx33 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1725 bp    Location:718080..729051   Strand:+
Raw sequence 
>bmy_01514
ATGGCACTAAAAGGCCGAGCCCTCTATGACTTCCGCAGCGAGAACAAGGAGGAAATCAGCATCCAGCAGGATGAGGACCTGCTCGTTTTCAGCGAGACCTCGCTGGATGGATGGCTGCAGGGCCAGAACAGCCGCGGTGAGACAGGGCTCTTCCCTGCCTCTTACGTGGAGATCATCCGTTCTGGCACCAGCTCCAACCATGCTGACTACTCCAGCAGTCCTGCAGGCTCTCTGGGCACTCAGGTGAGCTTATACGACAGCTCCAGCGTGGCAGACCCTTCCTGGAGTGGTGGGGGCAGTGGCTTCCTCTCAAACCAGGGTAGTTTCGAGGAGGACGATGATGATGACTGGGATGACTGGGATGATGGATGCACAGTGGTGGAGGAGCCACGGGCTGGTGGGCTGGGCGCCAACGGGCACCCCCCACTCAACTTCTCCTACCCTGGTGCCTACCCCAGCCAACACATGGCCTTCCGGCCCAAGCCACCCCTGGAGCGGCAGGACAGCCTGGCATCTGCCAAGCGAGGCAGCGTGGTGGGGCGCAACCTCAACCGCTTCTCGTGCTTCGTGCGCTCTGGCGTGGAGGCCTTCATCCTGGGTGATGTGCCCATGATGGCCAAGATTGCTGAGACATACTCCATTGAAATGGGCCCTCGCGGCCCCCAGTGGAAAGCCAACCCCCACCCATTTGCCTGCTCCGTGGAGGACCCCACCAAACAGACCAAATTCAAGGGCATCAAAAGCTACATCTCCTACAAGCTCACACCCACACACGCTGGCTCACCTGTCTACAGGCGCTACAAACACTTCGACTGGCTCTACAACCGCCTGCTGCACAAGTTCACTGTCATCTCGGTGCCCCACCTGCCAGAGAAGCAGGCCACAGGCCGCTTCGAGGAGGACTTCATTGAGAAGCGGAAGCGGCGGCTCATCCTCTGGATGGACCACATGACTAGCCACCCCGTGCTGTCCCAGTACGAGGGCTTCCAGCATTTCCTTAGCTGCCTGGATGACAAGCAGTGGAAGATGGGAAAACGCCGGGCCGAGAAGGACGAGATGGTGGGCGCCAGCTTCCTGCTCACCTTCCAGATCCCCACGGAGCACCAGGACCTGCAGGATGTGGAGGACCGTGTGGACACCTTCAAAGCCTTCAGCAAGAAGATGGACGACAGCGTCCTGCAGCTCAGCACCGTAGCATCGGAGCTGGTGCGCAAGCATGTGGGGGGCTTCCGCAAGGAATTCCAGAAGCTGGGCAATGCCTTCCAGGCCATCAGTCATGCCTTCCAGATGGACCCCCCCTTCAGCTCTGAAGCCCTCAACAGCGCCATTTCTCACACGGGCCGTACCTATGAAGCCGTGGGTGAGATGTTCGCCGAGCAGCCCAAGAACGACCTCTTCCAGATGCTCGACACGCTGTCTCTCTACCAGGGCCTGCTCTCCAACTTCCCCGACATCATCCACCTGCAGAAAGGTGCCTTTGCCAAGGTGAAGGAGAGCCAGCGCATGAGTGACGAGGGCCGCATGGCGCAGGACGAGGCAGATGGCATTCGCAGGCGCTGCCGCGTGGTGGGCTTCGCCCTGCAGGCTGAGATGAACCACTTCCACCAGCGCCGCGAGCTCGACTTCAAGCACATGATGCAGAACTACCTGCGCCAGCAGATCCTCTTCTACCAGCGGGTAGGCCAGCAGCTGGAGAAGACGCTGCACATGTATGACAGCCTCTGA

Related Sequences

bmy_01514T0 SequenceType object (3)

Length: 575 aa      View alignments
>bmy_01514T0
MALKGRALYDFRSENKEEISIQQDEDLLVFSETSLDGWLQGQNSRGETGLFPASYVEIIRSGTSSNHADYSSSPAGSLGTQVSLYDSSSVADPSWSGGGSGFLSNQGSFEEDDDDDWDDWDDGCTVVEEPRAGGLGANGHPPLNFSYPGAYPSQHMAFRPKPPLERQDSLASAKRGSVVGRNLNRFSCFVRSGVEAFILGDVPMMAKIAETYSIEMGPRGPQWKANPHPFACSVEDPTKQTKFKGIKSYISYKLTPTHAGSPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAEKDEMVGASFLLTFQIPTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGNAFQAISHAFQMDPPFSSEALNSAISHTGRTYEAVGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRMAQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLHMYDSL*