Sequence details bmy_01399 (Coding sequence)

Part of scaffold_33 (Scaffold)

For more information consult the page for scaffold_33 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARID5B ENSBTAG00000006729 (Cow)

Gene Details

AT-rich interactive domain-containing protein 5B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008847, Cow)

Protein Percentage 94.87%
cDNA percentage 93.54%
Ka/Ks Ratio 0.12634 (Ka = 0.0248, Ks = 0.1967)

Additional orthologs identified in other species via the OPTIC pipeline.

ARID5B (Human)   Arid5b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location:1287807..1294437   Strand:+
Raw sequence 
>bmy_01399
ATGGAGGATGACAAACTCCCCGCAATGGCGGATTATATCGCCAACTGCACCGTGAAGGTGGACCAGCTGGGCAGTGACGACATCCACAGTGCACTCAAGCAGACCCCGAAGGTCCTTGTGGTCCAGTCATTTGACATGTTCAAAGACAAAGACTTGACTGGGCCCATGAATGAGAACCATGGACTTAATTACACCCCCCTGCTCTACTCAAGGGGCAACCCAGGCATCATGTCCCCGCTGGCCAAGAAAAAACTTTTGTCCCAAGTGAGCGGGGCCGGCCTCTCCAGCAGCTACCCTTATGGCTCCCCACCCCCTCTGATCAGCAAAAAGAAACTGATTGTGAGGGACGACCGGTGTTCGGGTTTGTCCCAGGCCCATCACGGCCAAAGCGCTGACCACATGGCAGTCAGCCGGCCGTCAGTGATTCAGCACGTCCAGAGTTTCAGAAGCAAGCCCTCAGAGGAGAGAAAGAGCATCGGTGACATTTTTAAGCACGACAAACTGAGTCGATCGGAGCCCCACCGCTGCAGCTTCTCCAAGCATCACCTTAGCCCCCTTGCCGACTCCTACGTCCTCAAGCAAGACGTTCAGGAGGGCAAGGAGAAACTGCTAGAGAGAAGGGCTCTTCCCCACTCCCACATGCCTAGCTGCCTGGCCGATTTCTACTCATCTCCTCATCTCCACAGCCTCTACAGACACACTGAACACCATCTGCATAACGAACAGACATCCAAGTACCCTTGCAGGGACATGTACAGGGAATCGGAAAACAGTTCTTTTCCTTCCCACAAACACCAAGAGAAGCTCCACGTAAATTATCTGGCATCTCTACATCTGCAAGACAAAAAGTCGGCTGCAGCAGAAGCCCTCACAGATGATCAGCCAACGGACCTGAGCCTTCCCAAGAACCCTCACAAACCCACTGGCAAGGCCCTGGGCCTGGCCCACTCGGCGCCCGGGCCTCAGGAGAGCAAGGGCGCCTCCCAGTTCCAGGTCATAAACAGCCAGAGTCGAGACTGTCACCCCAAGGCCTGTCGGGTATCGCCCATGACCATGTCGGCCCCTAAAAAATACCCTGAATCGCTTTCCAGATCGGGAAGACCTCACCCTGTGAGACTGGAGAATTTCAGGAAGATGGAAGGCATGGTCCACCCCATCCTGCACCGGAAAATGAGCCCTCAGAACATTGGTGCAGCGCGTCCCATAAAGCGTAGCCTGGAGGATTTGGACCTTGTGATCGCCGGGAAAAAGGCCCGGGCCGTGTCTCCTCTGGACCCCTCCAAGGAGGTCTCTGGAAAGGAGAAGGCCTCAGAGCAGGAGAGCGAAGGCAGCAAGGCCACGCACAGTGGGCATGCCGGGGGCGCCTCGGAAAGCCACAAGCTGCCCCTCTCCTCCCCTATCTTCCCAGGTTTGTATTCTGGGAGCCTGTGTAACTCGGGCCTCAACTCCAGGCTCCCGGCTGGGTATTCTCATTCTCTGCAGTACTTGAAAAACCAGACTGTGCTTTCTCCACTCATGCAGCCTCTGGCTTTCCACTCACTTGTGATGCAAAGAGGAATTTTTACGTCGCCAACAAATTCTCAGCAGCTATATAGACACTTGGCTGCAGCCACACCTGTAGGAAGTTCGTATGGGGACCTTTTGCACAACAGCATTTACCCTTTAGCTGCTCTAAATCCTCAAGCCGCCTTCCCATCTTCTCAGCTGTCGTCCGTACACCCCAGTACAAAACTGTAA

Related Sequences

bmy_01399T0 Protein

Length: 579 aa      
>bmy_01399T0
MEDDKLPAMADYIANCTVKVDQLGSDDIHSALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGAGLSSSYPYGSPPPLISKKKLIVRDDRCSGLSQAHHGQSADHMAVSRPSVIQHVQSFRSKPSEERKSIGDIFKHDKLSRSEPHRCSFSKHHLSPLADSYVLKQDVQEGKEKLLERRALPHSHMPSCLADFYSSPHLHSLYRHTEHHLHNEQTSKYPCRDMYRESENSSFPSHKHQEKLHVNYLASLHLQDKKSAAAEALTDDQPTDLSLPKNPHKPTGKALGLAHSAPGPQESKGASQFQVINSQSRDCHPKACRVSPMTMSAPKKYPESLSRSGRPHPVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKATHSGHAGGASESHKLPLSSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAALNPQAAFPSSQLSSVHPSTKL*