Part of scaffold_31 (Scaffold)

For more information consult the page for scaffold_31 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPRE ENSTTRG00000004879 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, E

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004601, Bottlenosed dolphin)

Protein Percentage 84.07%
cDNA percentage 86.23%
Ka/Ks Ratio 0.20477 (Ka = 0.0389, Ks = 0.1901)

PTPRE ENSBTAG00000002435 (Cow)

Gene Details

receptor-type tyrosine-protein phosphatase epsilon

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003163, Cow)

Protein Percentage 95.93%
cDNA percentage 94.27%
Ka/Ks Ratio 0.05816 (Ka = 0.0176, Ks = 0.3018)

PTPRE  (Minke Whale)

Gene Details

protein tyrosine phosphatase, receptor type, E

External Links

Gene match (Identifier: BACU004759, Minke Whale)

Protein Percentage 80.33%
cDNA percentage 85.22%
Ka/Ks Ratio 0.53549 (Ka = 0.1486, Ks = 0.2774)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location:2213523..2170011   Strand:-
>bmy_01366
ATGGAGCCCTTCTGTCCGCTCCTGCTGGCCGGTGTTAGCCTGCCCCTCGCCAAGGCTTTCAAGGGCAACGAGACCACCACCGCGCAGAGCAACTGGACCTCCACGACCGCAGGCCCTCCGGCCCCCGGAGCGCCGCAGCCCCTGCTGGCCTGGCTGCTGCTGCCCCTGCTGCTCTGCCTGCTCCTCGCGGCCTACGTCTTCAGGTTCAGGAAGCAGAGGAAGGCGGTGGTCAGCTCCAACGACAAGAAGATGCCAAACGGAATCCTAGAAGAGCAAGAGCAGCAAAGGGTGATGCTTCTCAGCAGGTCCCCCTCGGGGCCCAAGAAGTACTTGCCTATCCCCGTGGGGCACCTGGAAGAGGAGATCCGGGTCCGGTCGGCGGATGACTGCAAGAGGTTTCGGGAGGAGTTCAATGAGAAGTGCTATCAGTACTGGCCGGACCAGGGCTGCTGGACCTACGGAAGCATCCGGGTGTGCGTGGAGGACTGCGTGGTCCTGGTGGACTACACCATCCGGAAGTTCTGCATTCACGCGGGCGTGGGCCGGACGGGCACCTTCATAGTGATCGATGCCATGATGGACATGATGCATGCCGAGCAGAAGGTGGGCGTCTTTGATTTCGTGTCCAGAATCCGCAATCAGCGGCCTCAGATGGTTCAGACGGACATGCAGTACACGTTCATCTACCAAGCCTTACTGGAGTACTACCTCTATGGGGACACCGAGCTGGACGTGTCCTCCCTGGAGAAGCACCTGCAGACGCTGCACGGCAGCACCACCCACTTCGACAAGGTCGGGCTGGAGGAGGAGTTCAAGAAATTGACAAATGTCCGGATCATGAAGGAGAACATGAGGACAGGCAACCTGCCGGCCAACATGAAGAAGGCCAGGGTCATCCAGATCATCCCATATGACTTCAACCGCGTCATCCTTTCCATGAAAAGGGGCCAGGAGTACACGGATTACATCAACGCGTCCTTTATAGACGGCTACCGGCAGAAGGACTACTTCATCGCCACCCAGGGGCCCCTGGCGCACACGGTGGAGGACTTCTGGAGGATGGTCTGGGAGTGGAAGTGCCACACGATCGTGATGCTGACCGAGGTCCAGGAGAGAGAGCAGGATAAATGCCACCAGTATTGGCCGACAGAGGGCTCAGTGACTCATGGAGAAATAACGATCGAAATAAAGAGCGATACCCTTTCTGAAGCCATCAGTATACGAGACTTCCTGGTCACTTTCAATCAGCCCCTGGCCCGCCAGGAGGAGCAGACCCGGGTCGTGCGACAGTTCCACTTCCACGGCTGGCCGGAGATCGGGATCCCCGCCGAGGGCAAGGGCATGATCGACCTCATTGCGGCCGTGCAGAAGCAGCAGCAGCAGACAGGCAACCACCCCATCACGGTGCACTGCAGTGCTGGAGCTGGGCGTACAGGGACTTTCATAGCACTCAGCAACATTCTGGAACGGGTCAAAGCTGAGGGACTTCTAGACGTATTCCAAGCTGTGAAGAGTTTACGACTTCAGAGGCCACATATGGTGCAAACCCTGGAACAGTATGAATTCTGCTACAAAGTGGTACAAGATTTTATTGATATATTTTCTGATTATGCTAATTTCAAATGA

Related Sequences

bmy_01366T0 Protein

Length: 542 aa      View alignments
>bmy_01366T0
MEPFCPLLLAGVSLPLAKAFKGNETTTAQSNWTSTTAGPPAPGAPQPLLAWLLLPLLLCLLLAAYVFRFRKQRKAVVSSNDKKMPNGILEEQEQQRVMLLSRSPSGPKKYLPIPVGHLEEEIRVRSADDCKRFREEFNEKCYQYWPDQGCWTYGSIRVCVEDCVVLVDYTIRKFCIHAGVGRTGTFIVIDAMMDMMHAEQKVGVFDFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTLHGSTTHFDKVGLEEEFKKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMVWEWKCHTIVMLTEVQEREQDKCHQYWPTEGSVTHGEITIEIKSDTLSEAISIRDFLVTFNQPLARQEEQTRVVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQAVKSLRLQRPHMVQTLEQYEFCYKVVQDFIDIFSDYANFK*