Sequence details bmy_01253 (Coding sequence)

Part of scaffold_25 (Scaffold)

For more information consult the page for scaffold_25 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCML1 ENSTTRG00000005666 (Bottlenosed dolphin)

Gene Details

sex comb on midleg-like 1 (Drosophila)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005349, Bottlenosed dolphin)

Protein Percentage 65.52%
cDNA percentage 80.97%
Ka/Ks Ratio 2.16932 (Ka = 0.2651, Ks = 0.1222)

SCML1 ENSBTAG00000017649 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023476, Cow)

Protein Percentage 55.12%
cDNA percentage 73.93%
Ka/Ks Ratio 1.269 (Ka = 0.3556, Ks = 0.2803)

SCML1  (Minke Whale)

Gene Details

sex comb on midleg-like 1 (Drosophila)

External Links

Gene match (Identifier: BACU004916, Minke Whale)

Protein Percentage 91.07%
cDNA percentage 96.23%
Ka/Ks Ratio 2.16774 (Ka = 0.0455, Ks = 0.021)

Additional orthologs identified in other species via the OPTIC pipeline.

SCML1 (Human)  

Genome Location

Sequence Coding sequence

Length: 1095 bp    Location:466814..451886   Strand:-
Raw sequence 
>bmy_01253
ATGTCCAGCTGCTCCAGTGAAGTCGATGTGTTTGACTTTCATAGAAGTAAAGTATTAACTACTCAACTTTTAAAATATCAGCAGGCAAGTGTTATATCTAACACATCCTACAACGAAGAGCAACAAAAAACAGTTCTGGATGTCCTTACTCACTGCCAGGTCATCTGTGATGCTATTCAAAACCTGGATAAGAAGTTTGATGTTATTCATGGAAAGGTTACAAAAATCCACCGTTTTTGTATGAAGTCATTGTGGCAAAATCGTTTGGTTTATGCTGGGTTTGTGTCATTTCAGAAGCCACTTGGATATGCATATAAAAATTATAATTACCTGCTTTCTAAAAAGATCAAATACCAGAAAATGAGGAAGAGGGAGCCTTCCTCTCCATTCTCTTACCCTGAAAGTTATAGCCCCACTTCGCCAGTACGAAGGCCACAAAATGATTCCCAGAGCAACCCTATGGGAACATCTTTCCAGTCCAAGGAGTCTCCGGAGCAGGAGCAGGAGCAGGAGCCAGGCCTCAGCCAGAGCCCGATGGTCCCCTCCGTCTTCTCCGCGCATTCCTACCAGCAGTACTACACGCCTGAGGACCCCATGCAGGGCTCCTCCTCCACGCCTTGCTGCCACAATCCAGCGGCCCACAGCACCTGCGGTCTTTTCTTAGCCACCCAGGCCACTGCAGCCGAACCTGCAACCATGCTGACCCAGGGTGAACGCAGTCCAGCACGTAACCGTGACATGATCGTCTACCCAGCTTTACTGGAAAACAATAGGCTCAGCCATGCTGGCTCACCTGTCTACCTCCCGACCGGCTTCGCTCCAAGTTCACCAGTTGGAAGTGACCCGGGTGTCCTCAAACAGAGCTTACTTGATGACCCTTCAACCTGGTCTGTGGATGAAGTGATCCTGTTTCTGAAACACATAGATCCTCAGACATCAGGCCCCCTCACCGACCTCTTCAGGCAACATGAAATTGACGGGAAAGCTCTGCTACTGCTCAAGAGTGACATGATGATGAAGTACATGGGGCTTAAGCTGGGGACAGCCGTGAAGCTGTGCCACTACATTGAAAGGCTTAAAAAGACAGATACTTAG

Related Sequences

bmy_01253T0 Protein

Length: 365 aa      View alignments
>bmy_01253T0
MSSCSSEVDVFDFHRSKVLTTQLLKYQQASVISNTSYNEEQQKTVLDVLTHCQVICDAIQNLDKKFDVIHGKVTKIHRFCMKSLWQNRLVYAGFVSFQKPLGYAYKNYNYLLSKKIKYQKMRKREPSSPFSYPESYSPTSPVRRPQNDSQSNPMGTSFQSKESPEQEQEQEPGLSQSPMVPSVFSAHSYQQYYTPEDPMQGSSSTPCCHNPAAHSTCGLFLATQATAAEPATMLTQGERSPARNRDMIVYPALLENNRLSHAGSPVYLPTGFAPSSPVGSDPGVLKQSLLDDPSTWSVDEVILFLKHIDPQTSGPLTDLFRQHEIDGKALLLLKSDMMMKYMGLKLGTAVKLCHYIERLKKTDT*