Sequence details bmy_00970 (Coding sequence)

Part of scaffold_19 (Scaffold)

For more information consult the page for scaffold_19 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYNGR1 ENSTTRG00000001608 (Bottlenosed dolphin)

Gene Details

synaptogyrin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001514, Bottlenosed dolphin)

Protein Percentage 94.23%
cDNA percentage 95.19%
Ka/Ks Ratio 0.12516 (Ka = 0.0285, Ks = 0.2278)

SYNGR1 ENSBTAG00000005765 (Cow)

Gene Details

synaptogyrin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040308, Cow)

Protein Percentage 80.24%
cDNA percentage 81.24%
Ka/Ks Ratio 0.07339 (Ka = 0.1249, Ks = 1.7015)

Additional orthologs identified in other species via the OPTIC pipeline.

SYNGR1 (Human)   Syngr1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 633 bp    Location:271227..277452   Strand:+
Raw sequence 
>bmy_00970
ATGCCTGCCCCTCCCCCACCACCACAGGTGTTCTCCATCGTGGTGTTCGGCTCCATCGTGAATGAGGGCTACCTCAACAGCCCCTCGGAGAGCGAGGAGTTTTGCATCTACAACCGCAACCCCAATGCCTGCGGCTACGGCGTGACCGTGGGCGTGCTTGCCTTCCTCACCTGCCTGCTTTACCTGGCCCTGGACGTGTACTTCCCGCAGATCAGCAGTGTCAAGGACCGTAAGAAGGCCGTCCTATCCGACATCGGCGTCTCGGCCTTCTGGGCCTTCCTCTGGTTCGTGGGCTTCTGCTACCTGGCCAACCAGTGGCAGGTCTCCAAGCCCAAGGACAACCTGCTGAACGAAGGGACAGACGCGGCCCGGGCTGCCATCGCCTTCTCCTTCTTCTCCATCTTCACGTGGGCGGGCCAGGCTGTGCTGGCCTTCCAGAGGTACCAGATTGGCGCAGACTCGGCCCTCTTCTCCCAGGACTACATGGACCCCAGCCAGGACTCCAGCATGCCTTACGCCCCCTACGTGGAGCCCAGCACCGGGCCAGACCCCGCCGGCATGGGTGGCACCTACCAGCAGCCGGCCAGCACCTTTGAGCCCGAGCCCCAGGGCTACCAGTCGCAGGGCTACTGA

Related Sequences

bmy_00970T0 Protein

Length: 211 aa      View alignments
>bmy_00970T0
MPAPPPPPQVFSIVVFGSIVNEGYLNSPSESEEFCIYNRNPNACGYGVTVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNLLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDPSQDSSMPYAPYVEPSTGPDPAGMGGTYQQPASTFEPEPQGYQSQGY*