Sequence detailsbmy_00512 (Coding sequence)

Part of scaffold_9 (SequenceType object (1))

For more information consult the page for scaffold_9 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HM13ENSTTRG00000005822 (Bottlenosed dolphin)

Gene Details

histocompatibility (minor) 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005497, Bottlenosed dolphin)

Protein Percentage 97.46%
cDNA percentage 97.08%
Ka/Ks Ratio 0.15918 (Ka = 0.0146, Ks = 0.0918)

HM13ENSBTAG00000008840 (Cow)

Gene Details

minor histocompatibility antigen H13

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011640, Cow)

Protein Percentage 96.61%
cDNA percentage 95.29%
Ka/Ks Ratio 0.09684 (Ka = 0.0182, Ks = 0.1876)

HM13 (Minke Whale)

Gene Details

histocompatibility (minor) 13

External Links

Gene match (Identifier: BACU015593, Minke Whale)

Protein Percentage 91.65%
cDNA percentage 93.45%
Ka/Ks Ratio 0.43898 (Ka = 0.0557, Ks = 0.1268)

Additional orthologs identified in other species via the OPTIC pipeline.

HM13 (Human)   H13 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1308 bp    Location:159818..200315   Strand:+
Raw sequence 
>bmy_00512
ATGGGGTTTTCAGGTCTCCCTAGGGATGGATACCCACTGCAATGGTCCAGTGTTCCTCTCCCTGCTGCCAGCAAGTTGCTTAGCAACCGGCCTCCTGTCCCTCTGCCACCGCTAGAGGGCGCGCGGGCGGGGAGACGTGAACGCGCACGCGTGCGCGGCGCGGGCCGGCGAGCGCCCGTCTTCACTTCTGCGTCTCTGCTGCAGCTGCTGGAGCTGGAGTTGGATCCCGAGTGCAGCCTTGCCATGGACTCGGCCCTCAGCGACCCGCATAACGGCAGTGTCGAGGCAGGCGGCCCAACCAACGGCACGACGCGGCCGCCTTCCACGCCCGAGGGCATCGCGCTGGCCTATGGCAGCCTCYTGCTCATGGCGCTGCTGCCCATCTTCTTCGGCGCCCTGCGCTCCGTGCGCTGCGCCCGCGGCAAGAATGCCTCGGACATGCCCGAGACCATCACCAGCCGGGACGCTGCCCGGTTCCCCATCATCGCCAGCTGCACGCTCTTGGGGCTCTACCTCTTTTTCAAAATATTCTCCCAGGAGTACATCAACCTCTTGCTGTCCATGTATTTCTTCGTGCTGGGAATCCTGGCCCTGTCCCACACCATCAGGGCTCTGGGGAGAACAAGGAAGATCATCAATTATGAGTTTGACACCAAGGACCTGGTGTGCCTGGGCCTGAGCAGCATCGTTGGCGTCTGGTACCTGCTGAGAAAGCACTGGATTGCCAACAACCTCTTCGGCCTGGCCTTTTCCCTTAACGGGGTGGAGCTCCTGCACCTGAACAACGTCAGCACCGGCTGCATCCTGCTGGGTGGGCTCTTCATCTACGATATCTTCTGGGTATTTGGCACCAATGTGATGGTGACAGTGGCCAAGTCCTTTGAGGCACCAATAAAATTGGTGTTTCCCCAGGATCTGCTGGAGAAGGGCCTGGAAGCGGACAATTTTGCCATGCTGGGACTCGGAGACATCGTCATTCCAGGAATCTTCATCGCCTTGCTGCTGCGTTTTGACATCAGCTTGAAGAAGAACACCCACACCTACTTCTACACCAGCTTTGCAGCCTACATCTTCGGCCTGGGCCTGACCATCTTCATCATGCACATCTTCAAACACGCCCAGCCTGCGCTCCTGTACCTGGTCCCCGCCTGCATCGGCTTTCCTGTCCTGGTGGCACTGGCCAAGGGAGAAGTGACAGAGATGTTCAGTTATGAGGAGTCAAATCCTAAGGATCCAGCAGCAGTGACAGAATCCAAAGAGGGAACAGAGGCCTCAACATCGAAGGGGCTGGAGAAGAAGGAGAAATGA

Related Sequences

bmy_00512T0 SequenceType object (3)

Length: 436 aa      View alignments
>bmy_00512T0
MGFSGLPRDGYPLQWSSVPLPAASKLLSNRPPVPLPPLEGARAGRRERARVRGAGRRAPVFTSASLLQLLELELDPECSLAMDSALSDPHNGSVEAGGPTNGTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIRALGRTRKIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNPKDPAAVTESKEGTEASTSKGLEKKEK*