Sequence details bmy_00403 (Coding sequence)

Part of scaffold_6 (Scaffold)

For more information consult the page for scaffold_6 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFT122 ENSTTRG00000011266 (Bottlenosed dolphin)

Gene Details

intraflagellar transport 122 homolog (Chlamydomonas)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010685, Bottlenosed dolphin)

Protein Percentage 95.44%
cDNA percentage 95.89%
Ka/Ks Ratio 0.25135 (Ka = 0.0199, Ks = 0.0793)

IFT122 ENSBTAG00000019121 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036344, Cow)

Protein Percentage 93.15%
cDNA percentage 91.56%
Ka/Ks Ratio 0.09521 (Ka = 0.0353, Ks = 0.3713)

IFT122  (Minke Whale)

Gene Details

intraflagellar transport 122 homolog (Chlamydomonas)

External Links

Gene match (Identifier: BACU015190, Minke Whale)

Protein Percentage 96.4%
cDNA percentage 96.82%
Ka/Ks Ratio 0.28857 (Ka = 0.0222, Ks = 0.0771)

Additional orthologs identified in other species via the OPTIC pipeline.

IFT122 (Human)  

Genome Location

Sequence Coding sequence

Length: 3333 bp    Location:455463..385822   Strand:-
Raw sequence 
>bmy_00403
ATGAGGGCCGTGTTGACGTGGAGAGATAAAGCCGAGCAGTGTGTATATGACCTCGCATTTAAGCCCGACGGAACCCAGCTGATTTTGGCTGCAGGAAACAGATTACTGGTTTACGACACGTCTGATGGCACCTTACTTCAGCCCCTAAAGGGACACAAAGATACTGTGTACTGTGTGGCATATGCGAAGGATGGCAAGCGCTTTGCTTCTGGATCAGCTGACAAAAGTGTTATTATCTGGACGTCAAAATTGGAAGGCATTCTGAAGTACACCTGGACAAATGACGGTCAGTACCTGGCTCTGGGGATGTTCAACGGGATCATCAGCATACGGAACAAAAACGGCGAGGAGAAGGTGAAGATTGAGCGGCCGGGGGGCTCCCTCTCCCCCGTATGGTCCATCTGCTGGAACCCTTCAAGCCGATGGGAGAGTTTCTGGATGAACAGAGAGAACGAGGATGCCGAGGAAGTCATTGTCAACAGATATTTTCAGGAAATCCCTTCCACTCTGAAGTCAGCAGTGTACAGTAGTCAGGGTAGTGAGGCAGAGGAGGAAGAGCCAGAGGAAGAGGACGACAGTCCCAGGGACGACAACTTAGAGGAACATAATGACATCCTGGCTGTAGCTGACTGGGGACAGAAGCTTTCCTTCTACCAGCTGAGTGGAAAACAGATTGGGAAGGATCGGTCACTGAACTTTGACCCCTGCTGCATCAGCTACTTTACTAAAGGGGAGTACATTTTGCTGGGGGGGTCAGACAAGCAAGTATCCCTTTTCACCAAGGATGGAGTGCGCCTCGGGACTGTTGGGGAGCAGAACTCCTGGGTGTGGACGTGTAAAGTGAAACCCGATTCCAACTATGTGGTGGTAGGCTGCCAGGATGGCACCATTTCCTTCTACCAGCTCATTTTCAGCACAGTCCACGGACTCTACAAGGACCGCTATGCCTACAGGGATAGCATGACTGATGTTGTCGTGCAGCACCTGATCACCGAGCAGAAAGTTCGGATTAAATGCAAAGAGCTTGTCAAGAAAATTGCCATCTACAAAAATCGATTAGCTATCCAACTGCCCGAGAAAATACTCATCTACGAGTTGTATTCAGATGACTCGTTGGACATGCGGTACCGGGTGAAGGAGAAGATTGTTAGGAAGTTTGAATGTAACCTCCTGGTGGTGTGTGCTGACCACATCATCCTCTGCCAGGAGAAGCGGCTGCAGTGCTTGTCCTTCAGCGGAGTGAAGGAGCGGGAGTGGCAAATGGAGTCTCTCATTCGCTACATCAAGGTGATCGGCGGCCCCCCAGGAAGGGAGGGTCTGTTAGTCGGCCTGAAGAACGGACAGATCCTGAAGATCTTTGTGGACAGTCTCTTTGCCATCGTCCTGCTAAAGCAGGCCACAGCCGTGCGCTGCCTGGACATGAGCGCCTCCCGCAACAAGTTGGCTGTGGTGGATGAAAACGACACGTGCCTGGTGTATGACATCCACACCAAGGAGCTGCTGTTTCAGGAGCCGAACGCCAACAGCGTGGCCTGGAACACCCAGTGTGAGGACATGCTCTGCTTCTCTGGAGGCGGCTACCTCAACATCAAGGCCAGCACCTTCCCCGTGCACCAGCAGAAGCTGCAGGGCTTCGTGGTCGGCTACAACGGCTCCAGGATCTTCTGCCTCCACGCCTTTTCTATGTCGGCCGTGGAGGTGCCACAGTCTGCTCCGATGTACCAGTACCTGGATAGGAAGATGTTCCGAGAAGCCTACCAGATTGCTTGCTTGGGCGTGACAGACACTGACTGGCGCGAGCTGGCCATGGAAGCTTTAGAAGGATTGGAGTTTGAAACAGCAAAGAAGGCCTTCACCAGAGTACAAGACCTCCGGTATTTAGAGCTCATCAACAGCATTGAGGAGAGGAAGAAGCGGGGAGAGACCAACAATGACCTGTTTCTGGCAGATGTGTTTGCCTACCAGGGGAAGTTCCACGAGGCCGCCAAACTGTACAAGAGGAGCGGGCACGAGAACCTCGCACTCGACATGTACACAGACCTCCGCATGTTCGAGTACGCCAAGGATTTCCTTGGATCTGGAGACCCCAAAGAAACAAAGATGCTAATCACCAAACAGGCCGACTGGGCTCGAAATATCAACGAGCCCAAAGCCGCCGTGGAGATGTACATCTCGGCGGGCGAGCACGGCAAGGCCATAGAGATCAGCGGCGACCACGGCTGGGTTGACACGCTCATCGACATTGCCCGTAAGCTGGACAAGGCCGAGCGGGAGCCCCTGCTGATGTGCGCCCACTACTTCAAGAAGCTGGATAACCCTGGCTATGCTGCCGAGACCTACCTGAAGATTGGTGACCTGAAGTCCTTGGTTCAGCTGCACGTGGAGACCCAGCGCTGGGATGAGGCCTTCGCCTTGGGTGAGAAGCATCCCGAGTTTAAGGATGACATCTACGTGCCCTACGCTCAGTGGCTAGCAGAGAGCGATCGTTTTGAGGAAGCCCAGAAAGCGTTCCACAAGGCCGGGCGGCAGGGGGAAGCAGTCAGGGTGCTGGAGCAGCTCACACACAATGCCGTGGTCGAGAGCAGATTTAATGACGCTGCCTATTATTACTGGATGCTGTCCATGCAGTGCCTCGATATAGCTCAAGACCCTGCCCAGAAGGACGTGATGCTCGGCAAGTTCCATCACTTCCAGCACTTGGCTGAGCTGTACCACGGCTACCACGCCATCCAGCGGTACACGGAGGAGCCGTTCAGTTTCCACCTTCCCGAAACGCTCTTCAACATCTCCAGGTTCCTGCTGCACAGCCTGACCAAGGACACTCCCCTGGGCATCTCTAAAGTGAACACGCTCTTCACTCTAGCCAAACAGAGCAAAGCACTGGGTGCCTACAAGCTGGCCCGGCACGCCTATGACAAGCTGCAGGGCCTGCAGACCCCCGCCAGGTTCCAGAAGTCCATYGAGCTGGGCAGCCTGACCATCCGCTCCAAGCCCTTCCATGACAGCGAGGAGCTGGTGCCCTTGTGCTACCGCTGCTCCACCAACAACCCGCTGCTAAACAACCTGGGCAACGTTTGCATCAATTGCCGCCAGCCCTTCGTCTTCTCAGCCTCTTCCTACGAGGTGCTGCACCTGGTTGAATTCTACCTGGAGGAGGGGATCACTGACGAAGAAGCCGTTTCCCTAATTGACCTGGAGGCACCAAGACACAAGCGTGAGAATAAATGGCAAGAGATCGCGAGCAACAGTATCCTAGGTGCCGGCCAGACCCTGTGTGTGTCGGCTGAGCGTCGGCCTGGGAGCACGCCAGGAGGCAGGGGCCTTGGGGGGTAA

Related Sequences

bmy_00403T0 Protein

Length: 1111 aa      View alignments
>bmy_00403T0
MRAVLTWRDKAEQCVYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPVWSICWNPSSRWESFWMNRENEDAEEVIVNRYFQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNLEEHNDILAVADWGQKLSFYQLSGKQIGKDRSLNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCKVKPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVVVQHLITEQKVRIKCKELVKKIAIYKNRLAIQLPEKILIYELYSDDSLDMRYRVKEKIVRKFECNLLVVCADHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDSLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHQQKLQGFVVGYNGSRIFCLHAFSMSAVEVPQSAPMYQYLDRKMFREAYQIACLGVTDTDWRELAMEALEGLEFETAKKAFTRVQDLRYLELINSIEERKKRGETNNDLFLADVFAYQGKFHEAAKLYKRSGHENLALDMYTDLRMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYISAGEHGKAIEISGDHGWVDTLIDIARKLDKAEREPLLMCAHYFKKLDNPGYAAETYLKIGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYVPYAQWLAESDRFEEAQKAFHKAGRQGEAVRVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIAQDPAQKDVMLGKFHHFQHLAELYHGYHAIQRYTEEPFSFHLPETLFNISRFLLHSLTKDTPLGISKVNTLFTLAKQSKALGAYKLARHAYDKLQGLQTPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFVFSASSYEVLHLVEFYLEEGITDEEAVSLIDLEAPRHKRENKWQEIASNSILGAGQTLCVSAERRPGSTPGGRGLGG*