Sequence details bmy_00095 (Coding sequence)

Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TFEB ENSTTRG00000016385 (Bottlenosed dolphin)

Gene Details

transcription factor EB

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015529, Bottlenosed dolphin)

Protein Percentage 99.66%
cDNA percentage 98.87%
Ka/Ks Ratio 0.02374 (Ka = 0.0014, Ks = 0.0586)

TFEB ENSBTAG00000012384 (Cow)

Gene Details

transcription factor EB

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035926, Cow)

Protein Percentage 97.69%
cDNA percentage 95.17%
Ka/Ks Ratio 0.03467 (Ka = 0.0096, Ks = 0.2762)

Additional orthologs identified in other species via the OPTIC pipeline.

TFEB (Human)   Tfeb (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location:5843510..5850027   Strand:+
Raw sequence 
>bmy_00095
ATGGCGTCACGCATCGGGCTCCGCATGCAGCTCATGCGGGAGCAGGCGCAGCAGGAGGAGCAGCGGGAGCGCATGCAGCAGCAGGCCGTCATGCATTACATGCAGCAGCAGCAGCAGCAGCAGCAGCTGGGGGCGCCGCCCACCCCCGCCATCAACACCCCCGTCCACTTCCAGTCTCCGCCACCTGTGCCCGGGGAGGTGCTGAAGGTGCAGTCCTACCTGGAGAACCCCACCTCCTACCACCTGCAGCAGTCCCGGGACCAGAAGGTGCGGGAGTACCTGTCTGAGACCTACGGGAACAAGTTTGCTGCCCACATCAGCCCTGCTCAGGGCTCCCCAAAGCCCCTGCCAGCCGCCTCCCCGGGCGTGCGGGCCGGACACGTGTTGTCGTCCTCAGCCGGCAACAGTGCTCCCAACAGCCCCATGGCCATGCTGCACATCGGCTCCAACCCTGAGCGGGAGTTTGATGTCATCGACAACATTATGTGTCTGGACGATGTCCTGGGCTTCATCAATCCAGAAACTCAGATTCCCAATACGCTGCCCCTGTCCAGCAGTCACCTAAATGTGTACAGTGGAGACCCCCAGGTCACCACCTCCCTGGTGGGCGTCACCAGCAGCTCCTGCCCAGCCGACCTGACCCAGAAGCGAGAGCTTACAGATGCTGAGAGCCGGGCCCTGGCCAAGGAGCGACAGAAGAAAGACAATCACAACCTCATTGAAAGGAGACGGAGGTTCAACATCAATGACCGCATCAAGGAGCTGGGAATGCTGATCCCCAAGGCCAACGACTTGGATGTGCGCTGGAACAAGGGCACCATCCTCAAGGCCTCTGTTGATTACATCCGGAGGATGCAGAAGGACCTGCAGAAGTCCCGGGAGCTGGAGAACCACTCTCGGCGCCTGGAGATGACCAACAAGCAGCTCTGGCTCCGCATCCAGGAGCTGGAGATGCAGGCTCGCGTGCACGGCCTCCCCACCACCTCGCCCTCGGGCATGAACATGGCCGAGCTGGCCCAGCAGGTGGTGAAGCAGGAGCTACCCAGCGAGGAGGGTCCGGGGGAGGCCCTGCTGCTGGGGGCCGAGGTCCCCGACCCTGAGCCACTGCCGGCTCTGCCCCCCCAGGCCCAGCTACCCCCGCCAGCCCAGCCAGCCCAGCCACCGTCCCCATTCCACCACCTGGACTTCAGCCACAGCCTGAGCTTTGGGGGTGGGGGCAACGAAGGGCCCCCGGGCTACCCCGAACCTCTGGGGCCAGAGCATGGCTCCCCGTTCCCCAACCTGTCCAAGAAGGATCTGGACCTCATGCTCCTGGACGACTCACTGCTACCACTGGCCTCCGACCCCCTCTTCTCCACTATGTCCCCCGAGGCCTCCAAAGCCAGCAGCCGCAGGAGCAGCTTCAGCATGGAGGAGGGCGACGTGCTGTGA

Related Sequences

bmy_00095T0 Protein

Length: 477 aa      View alignments
>bmy_00095T0
MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQLGAPPTPAINTPVHFQSPPPVPGEVLKVQSYLENPTSYHLQQSRDQKVREYLSETYGNKFAAHISPAQGSPKPLPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPEREFDVIDNIMCLDDVLGFINPETQIPNTLPLSSSHLNVYSGDPQVTTSLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALLLGAEVPDPEPLPALPPQAQLPPPAQPAQPPSPFHHLDFSHSLSFGGGGNEGPPGYPEPLGPEHGSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEGDVL*