Part of scaffold_0 (Scaffold)

For more information consult the page for scaffold_0 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CYP39A1 ENSTTRG00000008431 (Bottlenosed dolphin)

Gene Details

cytochrome P450, family 39, subfamily A, polypeptide 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007991, Bottlenosed dolphin)

Protein Percentage 76.63%
cDNA percentage 78.4%
Ka/Ks Ratio 0.42763 (Ka = 0.0528, Ks = 0.1234)

CYP39A1 ENSBTAG00000003632 (Cow)

Gene Details

24-hydroxycholesterol 7-alpha-hydroxylase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004736, Cow)

Protein Percentage 84.96%
cDNA percentage 89.68%
Ka/Ks Ratio 0.50694 (Ka = 0.0921, Ks = 0.1817)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1020 bp    Location:1782245..1809231   Strand:+
>bmy_00014
ATGGAATTCATTTCCCCAACAGTGGTTATAATCTTAGGTTGTGTTGCTCTTTTACTATTTCTTCAGTGGAAGAACTTGCGTGGACCCCCGTGCATAGGGGGCTGGATTCCTTGGATTGGAGCTGGATTTGAGTTTGGAAAAACCCCTCTAGAATTTATAGAGAAAGCAAGAATCAAGTATGGACCGATATTTACAATCGTTGCTCTGGGCACCCGAATGACCTTTGTTACTGAAGAAGAGGGAATTAATGTGTTTCTAAAATCCAAAGAAGTAAATTTTGAACTAGCAGTGCAAACTCCCGTCTATCGTACAGCATCAATCCCAAAGAATATCTTTTTAAAACTGCATGAGAAACTTTATATCATGGTGAAAGGGAAAATGGGGACTTTCAACCTATATCGGTTCACTGGACAATTGACTGAAGAATTACACGAACAGCTGGAGAATTTAGGCCCTCATGGGACCATGGACCTGAACAACTTAGTGAGGCATCTCCTTTACCCGGTCACAGTGAACGTGCTGTTTAAAAAAGGTCTGTTTCCCACAAATGAGAGGAAAATCAGGGAGTTCCATCAGCACTTTCAAGCTTATGATGAAGGTTTCGAATATGGGTCCCAGTTGCCAGAATGTCTCCTCAGAAACTGGTCAAAATCCAAAAACTGGCTTCTAGCACTTTTTGAGAAAAACATTCCAGATATAAAAACAAGCAAATCTGCAAAAGATAATTCCCCGACAGTAATGCAGGCTCTGCTGGATCTCCTAGAGATGGAAACAAATGAACAAAAGAGTCCCAATTATGGGCTCTTACTACTTTGGGCTTCTCTGTCCAATGCTGTCCCTGTTGCATTTTGGACATTTGCATTTGTCCTCTCTCATCCCAATATCCACAGGACCATTATGGAAGGCATATCATCTGTGTTTGGCACAGCAGGTACTAAAACTGAATTAAATTGCATAATTGAAGAGATATCTAATAATGTGTACTTGTCACACATTATGGGCAAAGTTAAATGCCCATAA

Related Sequences

bmy_00014T0 Protein

Length: 340 aa      View alignments
>bmy_00014T0
MEFISPTVVIILGCVALLLFLQWKNLRGPPCIGGWIPWIGAGFEFGKTPLEFIEKARIKYGPIFTIVALGTRMTFVTEEEGINVFLKSKEVNFELAVQTPVYRTASIPKNIFLKLHEKLYIMVKGKMGTFNLYRFTGQLTEELHEQLENLGPHGTMDLNNLVRHLLYPVTVNVLFKKGLFPTNERKIREFHQHFQAYDEGFEYGSQLPECLLRNWSKSKNWLLALFEKNIPDIKTSKSAKDNSPTVMQALLDLLEMETNEQKSPNYGLLLLWASLSNAVPVAFWTFAFVLSHPNIHRTIMEGISSVFGTAGTKTELNCIIEEISNNVYLSHIMGKVKCP*