KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:27:57 2014 Check: 00 .. Name: ENSTTRP00000001705/1-296 Len: 528 Check: 3703 Weight: 1.00 Name: ENSBTAP00000056108/1-358 Len: 528 Check: 3945 Weight: 1.00 Name: bmy_21753T0/1-528 Len: 528 Check: 8246 Weight: 1.00 Name: BACU018538/1-302 Len: 528 Check: 6133 Weight: 1.00 // 1 50 ENSTTRP00000001705/1-296 ---------- ---------- ---------- ---------- ------MGSE ENSBTAP00000056108/1-358 ---------- ---------- ---------- ------SELV GAAVFVMGLE bmy_21753T0/1-528 MPAQPLLSPG RAQGSGALGR LAGHIPEPAA QGPIPATELV TAAVFSMGPE BACU018538/1-302 ---------- ---------- ---------- ---------- ------MGPE 51 100 ENSTTRP00000001705/1-296 DGTRCWCCGL EPSRCAAGGR PAWGRHRPHS PCGHLQGQRP DSALSWGGRD ENSBTAP00000056108/1-358 DRTKCWCYGP EPSHWAAGSR PTRGQHGPHS LCNP-QGQGT DSALSWGGRD bmy_21753T0/1-528 DGTKCWCCGL EPSHCAAGGH PTWGHHRPHS PCGHLRGQRP DSALSWGGRD BACU018538/1-302 DGTKCWCCGL EPSSCAAGGH PTWGHRRPHS LCGHLRGQCP DRALSWGGRD 101 150 ENSTTRP00000001705/1-296 HMDGQILGQL PPPAEEEEY- -AGNAPSAKA -FPGMGSEEL LLPSFCDWPL ENSBTAP00000056108/1-358 HMDGQILGQL RPLAEEEEED GAALAP--RP AFPGMGSEEL RLASFYDWPL bmy_21753T0/1-528 HMDGQILGQL RPLAEEEEED GAGDAPSARP AFPGMGSEEL RLASFYDWPL BACU018538/1-302 HMDGQILGQL RPLAEEEEED GAGDAPSTRP AFPGMGSEEL RLASFYDWPL 151 200 ENSTTRP00000001705/1-296 NAMVPPXXXX XXXXXXX--- ---------- ---------- ---------- ENSBTAP00000056108/1-358 SAVVPPELLA AAGFFHT--- ---------- ---------- ---------- bmy_21753T0/1-528 SAVVPPELLA AAGFFHTGES QGPGLGGRGQ WEPPRLTSNS REPLPQKERP BACU018538/1-302 SAVVPPELLA AAGFFHT--- ---------- ---------- ---------- 201 250 ENSTTRP00000001705/1-296 ---------- ---------- ---------- XQQDKVRCFF CYGGLQSWEP ENSBTAP00000056108/1-358 ---------- ---------- ---------- GQQDKVRCFF CYGGLQSWER bmy_21753T0/1-528 LGSAQPWPWG THQAVQGTRR GQDQCLGSIP GQQDKVRCFF CYGGLQSWEQ BACU018538/1-302 ---------- ---------- ---------- GQQDKVRCFF CYGGLQSWEQ 251 300 ENSTTRP00000001705/1-296 GDDPWTEHAR WFP------- ---------- ---------- ---------- ENSBTAP00000056108/1-358 GDDPWTEHAR WFP------- ---------- ---------- ---------- bmy_21753T0/1-528 GDDPWTEHAR WFPRYGLRGP ASLSQSLGCR VSGTGVGGTL WGRRFCYFSF BACU018538/1-302 GDDPWTEHAR WFP------- ---------- ---------- ---------- 301 350 ENSTTRP00000001705/1-296 ---------- ---------- ------RCEF LLRTKGRDFV CRVQESCCRV ENSBTAP00000056108/1-358 ---------- ---------- ------RCEF LLRTKGRDFV CRVQESCCCP bmy_21753T0/1-528 DVQESVSKTA SQQAPTTPEP QLPPQGRCEF LLRTKGRDFV CRIQESCCRV BACU018538/1-302 ---------- ---------- ------RCEF LLRTKGRDFV CRIQESCCHV 351 400 ENSTTRP00000001705/1-296 PGSWDCSEEP EDAGPTTPSA PVHPGPELTT SGREAQVAPX XXXXX----- ENSBTAP00000056108/1-358 PGSWDRSEEP EDVGPATPSD -VGGGQEWPA WSQCPAVQAV LRMGFRPGQV bmy_21753T0/1-528 PGSWDRSEEP EDAGPATPSA PVPPGPELPT PSREAQVEGS REAGEGEGPP BACU018538/1-302 PGSWDRSEEP EDAGPATPSA PVPPGPELPT PSREVQVEGA READR----- 401 450 ENSTTRP00000001705/1-296 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000056108/1-358 Q-GLLQRKYH QVAPTGMSTS QLVADLLQEE DRGRVVGARG LPCPSASTEG bmy_21753T0/1-528 EVGAGPALLH PAVGGGHPRS GPPPHRPVQR VEVRVWGDVT GPRCGDPGGA BACU018538/1-302 ---------- ---------- ---------- ---------- ---------A 451 500 ENSTTRP00000001705/1-296 --XXXXXXXX XXXXXXXXVE KQLQRLREER TCRVCLDRAV AVVFVPCGHL ENSBTAP00000056108/1-358 RGQGPPRG-E PGGAQ--DAE EQLRRLREER TCRVCLDRTV GVVFVPCGHL bmy_21753T0/1-528 RAERVPVALE APGARDVDAE EQLQRLREER MCRVCLDRAV AVVFVPCGHL BACU018538/1-302 RAERVQVALE APGARDADAE EQLQRLREER TCRVCLDRTV AVVFVPCGHL 501 550 ENSTTRP00000001705/1-296 ACAECAPSLQ LCPICRAPIR SCVRTFLS ENSBTAP00000056108/1-358 ACAECAPSLQ QCPICRAPIR SCVRTFLS bmy_21753T0/1-528 ACAECAPSLQ LCPICRAPIR SCVRTFLS BACU018538/1-302 ACAECAPSLQ LCPICRAPIH SCVRTFLS