KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:27:36 2014 Check: 00 .. Name: ENSP00000362390/1-520 Len: 561 Check: 6990 Weight: 1.00 Name: ENSBTAP00000055948/1-513 Len: 561 Check: 4735 Weight: 1.00 Name: ENSTTRP00000013330/1-522 Len: 561 Check: 5261 Weight: 1.00 Name: bmy_14068T0/1-561 Len: 561 Check: 2085 Weight: 1.00 Name: BACU012546/1-523 Len: 561 Check: 4164 Weight: 1.00 // 1 50 ENSP00000362390/1-520 MALSSRARAF SVEALVGRPS KRKLQDPIQA EQPELREKKG GEEEEERRSS ENSBTAP00000055948/1-513 MALSSRAHAF SVEALVGRPS KRKLQDPREE TQPELLEKEG GEEEDRRSSA ENSTTRP00000013330/1-522 MALSSRAHAF SVEALVGRPS KRKLRDTREE AQLELLEKES GEAEEERRSS bmy_14068T0/1-561 MALSSRAHAF SVEALVGRPS KRKLRDTREE AQLELLEKEG GEAEEERRSS BACU012546/1-523 MALSSRAHAF SVEALVGRPS KRKLRDTREE AQLELLEKEG GEAEEERRSS 51 100 ENSP00000362390/1-520 AAG-KSEPL- ---------- ---------- ---------- --------EK ENSBTAP00000055948/1-513 AAGTKSEPP- ---------- ---------- ---------- --------EK ENSTTRP00000013330/1-522 AAGRKSEQP- ---------- ---------- ---------- --------EK bmy_14068T0/1-561 AAGRKSEQPV AKVPGEETRP VCSETGVSEK GARELRSSLK LSASLCPAEK BACU012546/1-523 AAGRKSEQP- ---------- ---------- ---------- -------AEK 101 150 ENSP00000362390/1-520 QPKTEPSTSA SSGCGSDSGY GNSSESLEEK D-IQMELQGS ELWKRFHDIG ENSBTAP00000055948/1-513 RTKTDPLATT F--------G FNSFGSLEEK DIIQVELQGS ELWKRFHDIG ENSTTRP00000013330/1-522 RPKTEPLATT FSGCRGGSGG CNSFGSLEEK DSIQVELQGS ELWKRFHDIG bmy_14068T0/1-561 RPKTEPLATT FSGCGGGSGG CNSFGSLEEK DAIQVELQGS ELWKRFHDIG BACU012546/1-523 RPKTEPLATT FSGCGGGSGG CNSFGSLEEK DAIQVELQGS ELWKRFHDIG 151 200 ENSP00000362390/1-520 TEMIITKAGR RMFPSVRVKV KGLDPGKQYH VAIDVVPVDS KRYRYVYHSS ENSBTAP00000055948/1-513 TEMIITKAGR RMFPSVRVKV KGLDPGKQYY VAIDVVPVDS KRYRYIYHSS ENSTTRP00000013330/1-522 TEMIITKAGR RMFPSVRVKI KGLDPGKQYY VAIDVVPVDS KRYRYVYHSS bmy_14068T0/1-561 TEMIITKAGR RMFPSVRVKV KGLDPGKQYY VAIDVVPVDS KRYRYVYHSS BACU012546/1-523 TEMIITKAGR RMFPSVRVKV KGLDPGKQYY VAIDVVPVDS KRYRYVYHSS 201 250 ENSP00000362390/1-520 QWMVAGNTDH LCIIPRFYVH PDSPCSGETW MRQIISFDRM KLTNNEMDDK ENSBTAP00000055948/1-513 QWMIAGNTDH SCITPRVYIH PDSPCSGETW MRQIISFDRV KLTNNEMDDK ENSTTRP00000013330/1-522 QWMVAGNTDH SCITPRFYVH PDSPCSGETW MRQIISFDRV KLTNNEMDDK bmy_14068T0/1-561 QWMVAGNTDH SCITPRFYVH PDSPCSGETW MRQIISFDRV KLTNNEMDDK BACU012546/1-523 QWMVAGNTDH SCITPRFYVH PDSPCSGETW MRQIISFDRV KLTNNEMDDK 251 300 ENSP00000362390/1-520 GHIILQSMHK YKPRVHVIEQ GSSVDLSQIQ SLPTEGVKTF SFKETEFTTV ENSBTAP00000055948/1-513 GHIILQSMHK YKPRVHVMKQ DSRVDMSRIQ SLPAEGVKTF SFKETEFTTV ENSTTRP00000013330/1-522 GHIILQSMHK YKPRVHVMKQ DSKVDMSRIQ SLPAEGVKTF SFKETEFTTV bmy_14068T0/1-561 GHIILQSMHK YKPRVHVMKQ DSRVDMSRIQ SLPAEGVKTF SFKETEFTTV BACU012546/1-523 GHIILQSMHK YKPRVHVMKQ DSRVDMSRIQ SLPAEGVKTF SFKETEFTTV 301 350 ENSP00000362390/1-520 TAYQNQQITK LKIERNPFAK GFRDTGRNRG VLDGLLETYP WRPSFTLDFK ENSBTAP00000055948/1-513 TAYQNQQITK LKIDRNPFAK GFRDPGRNRG VLDGLLETYP WRPSLTLDFK ENSTTRP00000013330/1-522 TAYQNQQITK LKIDRNPFAK GFRDPGRNRG VLDGVLETYP WRPSLTLDFK bmy_14068T0/1-561 TAYQNQQITK LKIDRNPFAK GFRDPGRNRG VLDGVLETYP WRPSLTLDFK BACU012546/1-523 TAYQNQQITK LKIDRNPFAK GFRDPGRNRG VLDGVLETYP WRPSLTLDFK 351 400 ENSP00000362390/1-520 TFGADTQSGS SGSSPVTSSG GAPSPLNSLL SPLCFSPMFH LPTSSLGMPC ENSBTAP00000055948/1-513 TFSADTQSGS SSSSPVTSSG GAPSPLNSLL SPLCSPPTFH IPTSSLGMPR ENSTTRP00000013330/1-522 TFGADTPSGS NGSSPATSSG GAPSPLNSLL SPPCSPPTFH IPTSSLGMPC bmy_14068T0/1-561 TFGADTQSGS NGSSPATSSG GAPSPLNSLL SPPCSPPTFH IPTSSLGMPC BACU012546/1-523 TFGADTQSGS NGSSPATSSG GAPSPLNSLL SPPCSPPTFH IPTSSLGMPC 401 450 ENSP00000362390/1-520 PEAYLPNVNL PLCYKICPTN FWQQQPLVLP APERLASSNS SQSLAPLMME ENSBTAP00000055948/1-513 PEVYLHSINL PLCYKICPNN FWQQQPLVLS ALESLASNNS SQSSAPLMME ENSTTRP00000013330/1-522 PEVYLHNINL PLCYKICPTN FWRQQPLVLP APERLASSNS SQSLAPLMME bmy_14068T0/1-561 PEAYLHNINL PLCYKICPTN FWRQQPLVLP APERLASSSS SQSLAPLMME BACU012546/1-523 PEVYLHNINL PLCYKICPTN FWRQQPLVFP APERLASSSS SQSLAPLMME 451 500 ENSP00000362390/1-520 VPMLSSLGVT NSKSGSSEDS SDQYLQAPNS TNQMLYGLQS PGNIFLPNSI ENSBTAP00000055948/1-513 VPMLSSLGVT NSKNGSSGDL NGQCLQAPKS SNQM-YELQA LENILSPNPI ENSTTRP00000013330/1-522 VPILSSLGAT NSKYGSSEDC NGQCQQASNS SSQMLYGLQA PGNILSPNPI bmy_14068T0/1-561 IPILSSLGAT NSKYVSSEDF NGQCQQASNS SNQMLYGLQA PGNILSPNSI BACU012546/1-523 IPILSSLGAT NSKYVSSEDF NGQCQQASNS SNQMLYGLQA PGNILSPNPI 501 550 ENSP00000362390/1-520 TPEALSCSFH PSYDFYRYNF SMPSRLISGS NHLKVNDDSQ VSFGEGKCNH ENSBTAP00000055948/1-513 AQEAIACSFH PSYGFYRYNF STPPRLVNAA NRLKVNDNSQ VSFIEGKYNH ENSTTRP00000013330/1-522 AQEAIGCSFH PSYGFYRYNF SMPSRLVNAT NHLKVNENSQ VSLIEGKCNH bmy_14068T0/1-561 AREAIGCSFH PSYGFYRYNF SMPSRLVNAT NHLKVNDNSQ VSLIEGKCNH BACU012546/1-523 AREAIGCSFH PSYGFYRYNF SMPSRLVNAT NHLKVNDNSQ VSLIEGKCNH 551 600 ENSP00000362390/1-520 VHWYPAINHY L ENSBTAP00000055948/1-513 SHWYPKISHC L ENSTTRP00000013330/1-522 ARWYPKINHC L bmy_14068T0/1-561 AHWYPKINHC L BACU012546/1-523 ARWYPKINHC L