KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:47 2014 Check: 00 .. Name: ENSP00000333593/1-308 Len: 311 Check: 6544 Weight: 1.00 Name: ENSTTRP00000012408/1-306 Len: 311 Check: 5659 Weight: 1.00 Name: bmy_03891T0/1-306 Len: 311 Check: 5914 Weight: 1.00 Name: ENSBTAP00000055581/1-308 Len: 311 Check: 4663 Weight: 1.00 // 1 50 ENSP00000333593/1-308 MRLLPEWFLL LFGPWLLRKA VSAQIPESGR PQYLGLRPAA AGAGAPGQQL ENSTTRP00000012408/1-306 MRLLPEWLLL LFGPWLLRKA VSAQIPESGR PQYLELGPAT AGEGAPGHRL bmy_03891T0/1-306 MRLLPEWLLL LFGPWLLRKA VSAQIPESGR PQYLELRPAT AGGGAPGHRL ENSBTAP00000055581/1-308 MRLLPEWLLL LFGPWLLRKA VSAQIPESRR PQYLELRPAT AGGGAPGHHL 51 100 ENSP00000333593/1-308 P---EPRSSD GLGVGRAWSW AWPTNHTGAL ARAGAAGALP AQRTKRKPSI ENSTTRP00000012408/1-306 P--APPRSSD GLGTARAWSW AWPANHTRTL ARAGVAGA-P VQRTKRKPSI bmy_03891T0/1-306 P--APPRSSD GLGTTRAWSW AWPANHTRAL ARAGAAGS-P AQRTKRKPSI ENSBTAP00000055581/1-308 PAAAAPKSSD GLGTARAWSW AWPANHTGTL ARAGAAGA-P AQRTKRKPSI 101 150 ENSP00000333593/1-308 KAARAKKIFG WGDFYFRVHT LKFSLLVTGK IVDHVNGTFS VYFRHNSSSL ENSTTRP00000012408/1-306 KAARAKKIFG WGDFYFRVHT LKFSLLVTGK IVDHVNGTFS VYFRHNSSSL bmy_03891T0/1-306 KAARAKKIFG WGDFYFRVHT LKFSLLVTGK IVDHVNGTFS VYFRHNSSSL ENSBTAP00000055581/1-308 KAARAKKIFG WGDFYFRVHT LKFSLLVTGK IVDHVNGTFS VYFRHNSSSL 151 200 ENSP00000333593/1-308 GNLSVSIVPP SKRVEFGGVW LPGPVPHPLQ STLALEGVLP GLGPPLGMAA ENSTTRP00000012408/1-306 GNLSVSIVPP SKRVEFGGVW LPGPAPHPLQ STLALEGVLP GLGPPLGL-- bmy_03891T0/1-306 GNLSVSIVPP SKRVEFGGVW LPGPAPHPLQ STLALEGVLP GLGPPLGL-- ENSBTAP00000055581/1-308 GNLSVSIVPP SKRVEFGGVW LPGPAPHPLQ STLALEGVLP GLGAPLGI-- 201 250 ENSP00000333593/1-308 AAAGPGLGGS LGGALAGPLG GALGVPGAKE SRAFNCHVEY EKTNRARKHR ENSTTRP00000012408/1-306 AAAGSGLGGT LGGALAGPLG GALGVPGTKE SRAFNCHVEY EKTNRARKHR bmy_03891T0/1-306 AAAGSGLGGT LGGAMASPLG GALGVPGTKE SRAFNCHVEY EKTNRARKHR ENSBTAP00000055581/1-308 AAAGPGLGGT LGGALAGPLG GALGVPGAKE SRAFNCHVEY EKTNRARKHR 251 300 ENSP00000333593/1-308 PCLYDPSQVC FTEHTQSQAA WLCAKPFKVI CIFVSFLSFD YKLVQKVCPD ENSTTRP00000012408/1-306 PCLYDPSQVC FTEHTQSQAA WLCAKLFKVI CIFVSFLSFD YKLVQKVCPD bmy_03891T0/1-306 PCLYDPSQVC FTEHTQSQAA WLCAKPFKVI CIFVSFLSFD YKLVQKVCPD ENSBTAP00000055581/1-308 PCLYDPSQVC FTEHTQSQAA WLCAKPFKVI CIFVSFLSFD YKLVQKVCPD 301 350 ENSP00000333593/1-308 YNFQSEHPYF G ENSTTRP00000012408/1-306 YNFQSEHPYF G bmy_03891T0/1-306 YNFQSEHPYF G ENSBTAP00000055581/1-308 YNFQSEHPYF G