KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:25 2014 Check: 00 .. Name: bmy_13326T0/1-271 Len: 491 Check: 2676 Weight: 1.00 Name: ENSBTAP00000055306/1-491 Len: 491 Check: 5869 Weight: 1.00 Name: BACU005979/1-476 Len: 491 Check: 956 Weight: 1.00 Name: ENSTTRP00000000273/1-476 Len: 491 Check: 678 Weight: 1.00 // 1 50 bmy_13326T0/1-271 ---------- -----MAAAV LRDPPQGSVT FEDVVVYFSW EEWGLLDEAQ ENSBTAP00000055306/1-491 PVALQPLAFP SPQVPMAAAV LTDPAQGNVT FEDVFVSFSQ EEWGLLDEAQ BACU005979/1-476 ---------- -----MAAAV LTDPAQGKVN FEDVFVYFSQ EEWGLLDEAQ ENSTTRP00000000273/1-476 ---------- ---VPLISVV IMGFIQGKVN FEDVFVYFSQ EEWGLLDEAQ 51 100 bmy_13326T0/1-271 RCLYHDVMLE NFALVTSLG- ---------- ---------- ---------- ENSBTAP00000055306/1-491 RLLYREVMLE NFALMASLGY ASSMSHGVSP QELGREPWVS DWANTIPALT BACU005979/1-476 RLLYREVMLE NFALMASLGY ASSMFHGVAP LELDSEPWLS DWADMTPAMT ENSTTRP00000000273/1-476 RLLYREVMLE NFALMASLGY ASSMFHGIAP LELDSEPWLS EWANMTPAMT 101 150 bmy_13326T0/1-271 ---------- CWYGMEDEEA FSVQSVSVEQ MSLGKTPTSD PSIQKTHPCE ENSBTAP00000055306/1-491 REAQSAGSPG CWHGMEDDEI RFEQSISIKR VSKGMIPKTI PSSQKAHPCE BACU005979/1-476 REAQSGGGPG CSHGMEEEEI HFEQSVSVKG VSQVTIPKTI LSSQKAHPCE ENSTTRP00000000273/1-476 REAQGGGGPG CSHGMEEEEI PFEQSVSVKG VSQVTIPKTI PSSQKAHPCE 151 200 bmy_13326T0/1-271 KCVMAGRDIL YLPEYQGLHP GQKSYTCEAC GKQFWFSPNH HQHQKHNDEK ENSBTAP00000055306/1-491 TCGPILRDVL HMAEHQETRP GQKPYLCVAC GKQLWFSANF PLHNQHSGEK BACU005979/1-476 TCGPILNDVL YLAEHQETHP GQKPHMCVAC GKQLWFSANL HRQKQHSGEK ENSTTRP00000000273/1-476 TCGPILKDVL YLAEHQETHP EQKPYMCVAC GKQLCFSANL HHQXXXXXXX 201 250 bmy_13326T0/1-271 PFKRDIDRAS FVTTYRFHVS GKPFTCEEVG KDFLAMLNLL QHQATLKGAK ENSBTAP00000055306/1-491 PHRRDVHRAL LVSSCPVQSS ETPFTTGEGC EDFPTSSSMF QQHYPLSKWK BACU005979/1-476 PCRGDEGRAF LVNGCSVQSL GMPFTTGEGC KDFPTSSSMC QHHAPLSKWK ENSTTRP00000000273/1-476 XXXXXXXXXX XXXXXXXXXX XXXFTTGEGC KDFPTSSSI- SHHAP-SKWK 251 300 bmy_13326T0/1-271 PHSSSRCVES FHSGKSHYKY SEYEKLFSYE YTLFQEGQLH TRESYYDCE- ENSBTAP00000055306/1-491 PQSDTHCAEV FHSGQKHYEC SECGKAFSRK DSLVQHQRVH TGERPYKCSE BACU005979/1-476 PQSNTKCAEA FHSGQRHYKC NECGKAFSRK DSLVQHQRVH TGERPYECSE ENSTTRP00000000273/1-476 PQSNTKCAEA FHSGQMHYKC NECGKAFSRK DSLVQHQRVH TGERPYECSE 301 350 bmy_13326T0/1-271 ---------- ---------- ---------- KPFNQSSILI NCQRPDTGAR ENSBTAP00000055306/1-491 CGKTFSRKPI LAQHQRIHTG EMPYECGICG KVFNHSSNLI VHQRVHTGAR BACU005979/1-476 CGKTFSRKPI LAQHQRIHTG EMPYECGICG KVFNHSSNLI VHQRVHTGAR ENSTTRP00000000273/1-476 CGKTFSRKPI LAQHQRIHTG EMPYECGICG KVFNHSSNLI VHQRVHTGAR 351 400 bmy_13326T0/1-271 SYECSECG-- ---------- ---------- ---------- ---------- ENSBTAP00000055306/1-491 PYKCSECGKA YSHKSTLVQH ESIHTGERPY ECSECGKYFG HKYRLIKHWS BACU005979/1-476 PYKCSECGKA YSHKSTLVQH ESIHTGERPY ECSECGKYFG HKYRLIKHWS ENSTTRP00000000273/1-476 PYKCSECGKA YSHKSTLVQH ESIHTGERPY ECSECGKYFG HKYRLIKHWS 401 450 bmy_13326T0/1-271 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055306/1-491 VHTGARPYEC IACGKFFSQS SDLIAHQRVH NGEKPYVCSE CGKAFSHKHV BACU005979/1-476 VHTGARPYEC IACGKFFSQS SDLIAHQRVH NGEKPYVCSE CGKAFSHKHV ENSTTRP00000000273/1-476 VHTGTRPYEC IACGKFFSQS SDLIAHQRVH NGEKPYVCSE CGKAFSHKHV 451 500 bmy_13326T0/1-271 ---------- ---------- ---------- ---------- - ENSBTAP00000055306/1-491 LMQHLRIHTG ERPYKCSECG KAFRQRASLI RHWKVHAGER P BACU005979/1-476 LVQHHRIHTG ERPYKCSECG KAFRQRASLI RHWKVHAGET P ENSTTRP00000000273/1-476 LVQHHRIHTG ERPYKCSECG KAFRQRASLI RHWKVHAGER P