KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:23 2014 Check: 00 .. Name: ENSP00000443410/1-389 Len: 390 Check: 2237 Weight: 1.00 Name: ENSBTAP00000055293/1-390 Len: 390 Check: 81 Weight: 1.00 Name: bmy_14066T0/1-367 Len: 390 Check: 3047 Weight: 1.00 Name: BACU012317/1-390 Len: 390 Check: 9295 Weight: 1.00 // 1 50 ENSP00000443410/1-389 MSEIRFTNLT WDQVITLDQV LDEVIPIHGK GNFPTMEVKP KDIIHVVKDQ ENSBTAP00000055293/1-390 MSEIRFSNLT WDQVITLDKV LDEVIPVHGR GNFPTLAVKP KDIIHVVKDQ bmy_14066T0/1-367 MSEIRFSNLT WDQVITLHQV LDEVIPIHGR GNFPTLEVKP KDIIHVVKDQ BACU012317/1-390 MSEIRFSNLT WDQVITLHQV LDEVIPIHGR GNFPTLEIKP KDIIHVVKDQ 51 100 ENSP00000443410/1-389 LIGQGIIVKD ARLNGSVASY ILASHNGISY KDLDVIFGVE LPGNEEFQVV ENSBTAP00000055293/1-390 LIEQGIIVKD TRLNGSTASY ILASHSGISY KDLDVIFGVE LPSDQEFQVV bmy_14066T0/1-367 LIEQGIIVKD TRLNGSTASY VLASHNGMSY KDLDVIFGIE LPSDQEFQLV BACU012317/1-390 LIQQGIIVKD TRLNGSTASY VLASHNGMSY KDLDVIFGIE LPSDQEFQLV 101 150 ENSP00000443410/1-389 KDAVLDCLLD FLPKDVKKEK LSPDIMKDAY VQKLVKVCNG HDCWSLISLS ENSBTAP00000055293/1-390 KDVVLGCLFD FLPKGVKKDK ITLNTMKEAY VQKMVKVCNK HDRWSLISLS bmy_14066T0/1-367 KDVVLGCLLD FLPKGVKKEK ITLKTMKEAY VQKMVKVCNK HDRWSLISLS BACU012317/1-390 KDVVLGCLLD FLPKGVKKEK STLKTMKEAY VQKMVKVCNK HDRWSLISLS 151 200 ENSP00000443410/1-389 NNTGKNLELK FVSSLRRQFE FSVDSFQIVL DPMLDFYSDK NAKLTKESYP ENSBTAP00000055293/1-390 NNTGKNVELK FVNSLRRQFE FSVDSFQIVL DPMLDFYTDK NGNLTNECYP bmy_14066T0/1-367 NNAGKNVELK FVNSLRRQFE FSVDSFQIVL DPMLDFYSDK SRKLTKELYP BACU012317/1-390 NNAGKNVELK FVNSLRRHFE FSVDSFQIVL DPMLDFYSDK SRKLTKELYP 201 250 ENSP00000443410/1-389 VVVAESMYGD FQEAMTHLQH KLICTRKPEE IRGGGLLKYC SLLVHGFKPA ENSBTAP00000055293/1-390 VVVAESMYGD FQEAMTHLQY KLISTRKPEE IRGGGLLKYS NLLVRDFKPA bmy_14066T0/1-367 VVVAESMYGD FQEAMTHLQH KLISTRKPEE IRGGGLLKYS NLLVHNFKPV BACU012317/1-390 VVVAESMYGD FQEAMTHLQH KLISTRKPEE IRGGGLLKYS NLLVHNFKPV 251 300 ENSP00000443410/1-389 CMSEIKNLER YMCSRFFIDF PHIEEQQKKI ESYLHNHFIG EGMTKYDYLM ENSBTAP00000055293/1-390 CEAEIKTLER YMCSRFFIDF PDVAEQQKKI ESYLRNHFIG EEKSKYDYLM bmy_14066T0/1-367 CEAEIKTQER YMCSRFFIDF PDVAEQRKKI ESYLYNHFIG EEKRKYDYLM BACU012317/1-390 CEAEIKTQER YMCSRFFIDF PDVAEQRKKI ESYLYNHFIG EEKRKYDYLM 301 350 ENSP00000443410/1-389 TLHGVVNEST VCLMSYERRQ ILHLITMMAL KVLGELNILP NTQKVTCFYQ ENSBTAP00000055293/1-390 TLHGVVNQST VCLMGLERRQ TLNMIALMAL KVLGEQNILP NTDNVTCFYQ bmy_14066T0/1-367 TLHGVVNEST VCLMGHERRQ TLNMITLMAL KVLGEQNILP NTSK------ BACU012317/1-390 TLHGVVNEST VCLLGHERRQ TLNMITLMAL KVLGEQNILP NTSKVTCFYL 351 400 ENSP00000443410/1-389 PAPYFAAEAR YP-IYVIPEP PPVSFQPYHP LHFRGSNGMS ENSBTAP00000055293/1-390 PAPYFVAEGG YPTYYVTSGP PPIFFQPYHP LHFHVPNGMI bmy_14066T0/1-367 --------GS FGTIRIKCLQ KAMVAQAVNA K--------- BACU012317/1-390 PAPYFAAGGG SPTYYVTSGL PPTLFQPYHP LHFHVPNGMA