KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:13 2014 Check: 00 .. Name: ENSTTRP00000012379/1-467 Len: 470 Check: 1486 Weight: 1.00 Name: ENSP00000358932/1-469 Len: 470 Check: 5657 Weight: 1.00 Name: ENSBTAP00000055253/1-470 Len: 470 Check: 4768 Weight: 1.00 Name: bmy_14496T0/1-410 Len: 470 Check: 1031 Weight: 1.00 Name: BACU011232/1-364 Len: 470 Check: 9120 Weight: 1.00 // 1 50 ENSTTRP00000012379/1-467 MCVVCFVKAL VHLFKIYLTA NYTYNFRGWP VDLRWDDVH- AAGRGSGHRG ENSP00000358932/1-469 MCVICFVKAL VRVFKIYLTA SYTYPFRGWP VAFRWDDVR- AVGRSSSHRA ENSBTAP00000055253/1-470 MCVVCFVKAL VHVFKIYLTA NYTYNFRGWP VDFRWDDVRA AAGSGSSHRA bmy_14496T0/1-410 MCVVCFVKAL VHLFKIYLTA NYTYNFRGWP VDFRWDD--- ---------- BACU011232/1-364 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012379/1-467 LTCPAAAAGM WLLQGAALGE DVQGRPSRGA RSQAQCLLQQ ISELPGQLAS ENSP00000358932/1-469 LTCAAAAAGV WLLRDETLGG DALGRPPRGA RSQAQCLLQQ LRELPGQLAS ENSBTAP00000055253/1-470 LTCAAAAAGV WLLRGAALGE DSPVRLPRAA RSQAQCLLQQ IRELPSQLAS bmy_14496T0/1-410 ---------- ---------- ---------- ---------- -------LAS BACU011232/1-364 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000012379/1-467 YVLAHSVGRW FVYPGSMFLM TRALLPLLRQ GQERLVDCYH GRCAKLVACD ENSP00000358932/1-469 YALAHSLGRW LVYPGSVSLM TRALLPLLQQ GQERLVERYH GRRAKLVACD ENSBTAP00000055253/1-470 YALAHSLGRW LVYPGSMFLM TRALLPLLQQ GQERLVERYR GRRAKLVACD bmy_14496T0/1-410 YALAHSMGRW LVYPGSMFLM TRALLPLLQQ GQERLVDHYR GRRAKLVACD BACU011232/1-364 ------MGRW LVYPGSMFLM TRALLPLLQQ GQERLVDRYR GRRAKLVACD 151 200 ENSTTRP00000012379/1-467 GNEIDTMFMD RHQRLGSHGR GLRLAICCEG NADFYEMGCL SAPLEAGYSV ENSP00000358932/1-469 GNEIDTMFMD RRQHPGSHVH GPRLVICCEG NAGFYEMGCL SAPLEAGYSV ENSBTAP00000055253/1-470 GNEIDTMFMD RRQDPGSHGR GLRLVICCEG NAGFYEMGCL SAPLEAGYSV bmy_14496T0/1-410 GNEIDTMFMD RRQRPGSHGR GLRLVICCEG NAGFYEMGCL SAPLEAGYSV BACU011232/1-364 GNEIDTMFMD RRQRPGSHGR GLRLVICCEG NAGFYEMGCL SAPLEAGYSV 201 250 ENSTTRP00000012379/1-467 LGWNHPGFGG STGAPFPQHD ANAMDVVVKY ALYRLHFPPA HVVVYGWSIC ENSP00000358932/1-469 LGWNHPGFGS STGVPFPQHD ANAMDVVVEY ALHRLHFPPA HLVVYGWSVG ENSBTAP00000055253/1-470 LGWNHPGFGG STGAPFPQHD ANAMDVVVKY ALHRLHFPPA HVVVYGWSIG bmy_14496T0/1-410 LGWNHPGFGG STGAPFPQHD ANAMDVVVKY ALHRLHFPPA HVVVYGWSIG BACU011232/1-364 LGWNHPGFGG STGAPFPQHD ANAMDVVVKY ALHRLHFPPA HVVVYGWSIG 251 300 ENSTTRP00000012379/1-467 GFTASWATMT YPEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358932/1-469 GFTATWATMT YPELGALVLD ATFDDLVPLA LKVMPHSWKG LVVRTVREHF ENSBTAP00000055253/1-470 GFTATWATMT YPELGALVLD ATFDDLVPLA LKVMPHSWKG LVVRTVREHF bmy_14496T0/1-410 GFTATWATMT YPELGALVLD ATFDDLVPLA LKVMPHSWKG LVVRTVREHF BACU011232/1-364 GFTATWATMT YPELGALVLD ATFDDLVPLA LKVMPHSWKG LVVRTVREHF 301 350 ENSTTRP00000012379/1-467 XXXXXXXXXX XXXXXXXLRR TPDDVVSTSG PLRPLPSGDV EGHRSNELLL ENSP00000358932/1-469 NLNVAEQLCC YPGPVLLLRR TQDDVVSTSG RLRPLSPGDV EGNRGNELLL ENSBTAP00000055253/1-470 NLNVAEQLCR YPGPVLLLRR TQDDVVSTAG HLRPLPSGVV EGNRGNELLL bmy_14496T0/1-410 NLNVAEQLCR YPGPVLLLRR TLDDVVSTSG HLRPLPSGDV EGHRGNELLL BACU011232/1-364 NLNVAEQLCR YPGPVLLLRR TLDDVVSTSG HLRPLPWGDV EGHRGNELLL 351 400 ENSTTRP00000012379/1-467 R-LPHRYPAV MAREGLTVVT LWLRAGSLAQ EATFYARYRV DDDWCLALLR ENSP00000358932/1-469 RLLEHRYPVV MAREGRAVVT RWLRAGSLAQ EAAFYARYRV DEDWCLALLR ENSBTAP00000055253/1-470 RLLQHRYPAV MAREGLAIVT RWLRAGSLAQ EAAFYARYRV DDEWCLSLLR bmy_14496T0/1-410 RLLQHRYPAV MAREGLAVVT RWLRAGSLAQ EAAFYARYRV DDEWCLALLR BACU011232/1-364 RLLQHRYPAV MAREGLAVVT RWLRAGSLAQ EAAFYARYRV DDEWCLDLLR 401 450 ENSTTRP00000012379/1-467 SYRARCEDRQ EDEEAWGPHG LAFPWLVGQG LSRRRRWQLA RFLARQHLKN ENSP00000358932/1-469 SYRARCEEEL EGEEALGPHG PAFPWLVGQG LSSRRRRRLA LFLARKHLKN ENSBTAP00000055253/1-470 SYLTHCEDQQ EDEETWGSHG LAFPWLVGQG LSPRRRRQLA LFLARKHLKN bmy_14496T0/1-410 SYRARCEDRQ EDEEAWGPHG LAFPWLVGQG LSRRRRRQLA LFLARQHLKN BACU011232/1-364 SYRARCEDRQ EDQEAWGPHG LAFPWLVGQG LSRRRRRQVA LFLARQHLRN 451 500 ENSTTRP00000012379/1-467 VEATHCSPLE PEDF-LPWRL ENSP00000358932/1-469 VEATHFSPLE PEEFQLPWRL ENSBTAP00000055253/1-470 VEATHCSPLE PEDFQLPWRL bmy_14496T0/1-410 VEATHCSPLE PEDFQLPWRL BACU011232/1-364 VEATHCSPLE PEDFQLPWRL