KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:21 2014 Check: 00 .. Name: BACU012410/1-349 Len: 413 Check: 2000 Weight: 1.00 Name: ENSP00000016171/1-410 Len: 413 Check: 4134 Weight: 1.00 Name: ENSBTAP00000055003/1-413 Len: 413 Check: 7095 Weight: 1.00 Name: ENSTTRP00000011220/1-409 Len: 413 Check: 9310 Weight: 1.00 Name: bmy_14139T0/1-392 Len: 413 Check: 120 Weight: 1.00 // 1 50 BACU012410/1-349 ---------- ---------- ---------- ---------- ------MKFH ENSP00000016171/1-410 MQRLLFPPLR ALKGRQYLPL LAPRAAPRAQ CDC---IRRP LRPGQYSTIS ENSBTAP00000055003/1-413 MQRLLFTPLT AFLGSPCLRL LVPRVAPRTQ CGCSCGIRRP LRPGQYSTIS ENSTTRP00000011220/1-409 MQRLLFPPLK AVMGSPCLRL LIPGAAPRTQ CGCSCGFRRP LRPGQYSTIS bmy_14139T0/1-392 MQRLLFPPLK AVMGSPCLRL LIPGAAPRTQ CGCSCGIRRP LRPGQYSTIS 51 100 BACU012410/1-349 DDTIHPDQAT TNILHFAAKI QMSN------ ---------- --NRLTESGL ENSP00000016171/1-410 EVALQSGRGT VSLPSKAAER VVGRWLLVCS GTVAGAVILG GVTRLTESGL ENSBTAP00000055003/1-413 DVALQPGRST VSLPSKAAER VVGRWLLVCS GTVAGAVILG GVTRLTESGL ENSTTRP00000011220/1-409 EVALQPGRGT VSQPSKAAER VVGRWLLVCS GTVAGAVILG GVTRLTESGL bmy_14139T0/1-392 EVALQPGRGT VSHPSKAAER VVGRWLLVCS GTVAGAVIIG GVTRLTESGL 101 150 BACU012410/1-349 SMVDWHLIKG MKPPTSQEEW EAEFQKYQQF PEFKILNHDM TLAEFKFIWY ENSP00000016171/1-410 SMVDWHLIKE MKPPTSQEEW EAEFQRYQQF PEFKILNHDM TLTEFKFIWY ENSBTAP00000055003/1-413 SMVDWHLIKE MKPPTSKEEW EAEFQKYQQF PEFKILNHDM TLAEFKFIWY ENSTTRP00000011220/1-409 SMVDWHLIKG MKPPTSQEEW EAEFQKYQQF PEFKILNHDM TLAEFKFIWY bmy_14139T0/1-392 SMVDWHLIKE MKPPTSQEEW EAEFQKYQQF PEFKILNHDM TLAEFKFIWY 151 200 BACU012410/1-349 MEYSHRMWGR LVGLAYILPA VYFWRKGWLT HGLKGRVLAL CGLVCFQGLL ENSP00000016171/1-410 MEYSHRMWGR LVGLVYILPA AYFWRKGWLS RGMKGRVLAL CGLVCFQGLL ENSBTAP00000055003/1-413 MEYSHRMWGR LVGLAYILPA AYFWKKGWLT RGLKGRVLAL CGLVCFQGLL ENSTTRP00000011220/1-409 MEYSHRMWGR LVGLVYILPA AYFWRKGWLT HGLKGRVLAL CGLVCFQ--- bmy_14139T0/1-392 MEYSHRMWGR LVGLAYILPA VYFWRKGWLT HGLKGRVLAL CGLVCFQGLL 201 250 BACU012410/1-349 GWYMVKSGLE EKPDSHDIPR VSQYRLAAHL GSALVLYCAS LWTSLSLLLP ENSP00000016171/1-410 GWYMVKSGLE EKSDSHDIPR VSQYRLAAHL GSALVLYCAS LWTSLSLLLP ENSBTAP00000055003/1-413 GWYMVKSGLE EKPDSHDIPR VSQYRLAAHL GSALVLYCAS LWTSLSLLLP ENSTTRP00000011220/1-409 -WYMVKSGLA EKPDSHDIPR VSQYRLAAHL GSALVLYCTS LWTSFSLLLP bmy_14139T0/1-392 GWYMVKSGLE EKPDSHDIPR VSQYRLAAHL GSALVLYCAS LWTSLSLLLP 251 300 BACU012410/1-349 QHKLPETRQL LRLRRFAHGT AGLVFLTALS GAFVAGLDAG LVYNSFPKMG ENSP00000016171/1-410 PHKLPETHQL LQLRRFAHGT AGLVFLTALS GAFVAGLDAG LVYNSFPKMG ENSBTAP00000055003/1-413 QHKLTETRQL LRLRRFAHGT AGLVFLTALS GAFVAGLDAG LVYNSFPKMG ENSTTRP00000011220/1-409 QHKLPETRQL LRLRRFAHGT AGLVFLTALS GAFVAGLDAG LVYNSFPKMG bmy_14139T0/1-392 QHKRDD---- ---------- -------GWR GAFVAGLDAG LVYNSFPKMG 301 350 BACU012410/1-349 ESWIPEDLFT FSPLLRNVFE NPTTVQFDHR ILGITSVAAI TALYFLSRRI ENSP00000016171/1-410 ESWIPEDLFT FSPILRNVFE NPTMVQFDHR ILGITSVTAI TVLYFLSRRI ENSBTAP00000055003/1-413 ESWIPEDLFT FSPLLRNVFE NPTMVQFDHR VLGIASVTAV TVLYFLSRRI ENSTTRP00000011220/1-409 ESWIPEDLFT FSPLLRNVFE NPTTVQFDHR ILGITSVAAI TALYFLSRRI bmy_14139T0/1-392 ESWIPEDLFT FSPLLRNVFE NPTMVQFDHR ILGITSVAAI TALYFLSRRI 351 400 BACU012410/1-349 PLPRRTKIAA VTLLALAYTQ VGLGISTLLM YVPTPLAATH QSGSLAVLSV ENSP00000016171/1-410 PLPRRTKMAA VTLLALAYTQ VGLGISTLLM YVPTPLAATH QSGSLALLTG ENSBTAP00000055003/1-413 PLPRRTKIAA TTLLALAYTQ VGLGISTLLM YVPTPLAATH QSGSLALLSV ENSTTRP00000011220/1-409 PLPRRTKIAA VTLLALAYTQ VGLGISTLLM YVPTPLAATH QSGSLAVLSA bmy_14139T0/1-392 PLPRRTKIAA VTLLALAYTQ VGLGISTLLM YVPTPLAATH QSGSLAVLSV 401 450 BACU012410/1-349 ALWLMNELRR VPK ENSP00000016171/1-410 ALWLMNELRR VPK ENSBTAP00000055003/1-413 ALWLMNELRR VPK ENSTTRP00000011220/1-409 ALWLMSELRR VPK bmy_14139T0/1-392 ALWLMNELRR VPK