KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:23 2014 Check: 00 .. Name: ENSP00000267339/1-420 Len: 496 Check: 3779 Weight: 1.00 Name: bmy_03972T0/1-328 Len: 496 Check: 6205 Weight: 1.00 Name: BACU017409/1-247 Len: 496 Check: 3713 Weight: 1.00 Name: ENSBTAP00000054552/1-354 Len: 496 Check: 7681 Weight: 1.00 Name: ENSTTRP00000010361/1-418 Len: 496 Check: 725 Weight: 1.00 // 1 50 ENSP00000267339/1-420 MSAAGAGAGV EAGFSSEELL SLRFPLHRAC RDGDLATLCS LLQQTPHAHL bmy_03972T0/1-328 ---------- ------MPVS SPLLP----- ---------- ---------- BACU017409/1-247 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054552/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010361/1-418 MSAAGAGAGV EAGFXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 51 100 ENSP00000267339/1-420 ASEDSFYGWT PVHWAAHFGK LECLVQLVRA GATLNVSTTR YAQTPAHIAA bmy_03972T0/1-328 ---------- -------FSK LECLIQLVRA GATLDVSTTR YAQTPAHIAA BACU017409/1-247 ---------- -------LSK LECLIQLVRA GAALDVSTTR YAQTPAHTAA ENSBTAP00000054552/1-354 ---------- -------FSK LECLIQLVRA GATLDVSTTR YAQTPAHIAA ENSTTRP00000010361/1-418 XXXXXXXXXX XXXXXXXXXX LECLIQLVRA GATLDVSTTR YAQTPAHIAA 101 150 ENSP00000267339/1-420 FGGHPQCLVW LIQAGANINK PDCEGETPIH KAARSGSLEC ISALVANGAH bmy_03972T0/1-328 FGGHPQCLVW LIQAGASINK PDCEGETPIH KAARSGSLDC ISALVANGAH BACU017409/1-247 FGGHPQCLVW LIQAGASINR PDCEGETPIH KAARSGSLDC ISALVANGAH ENSBTAP00000054552/1-354 FGGHPQCLVW LIQAGASINK PDCEGETPIH KAARSGSLDC ISALVANGAQ ENSTTRP00000010361/1-418 FGGHPQCLVW LIQAGASINK PDCEGETPIH KAARSGSLDC ISALVANGAH 151 200 ENSP00000267339/1-420 VD-------- ---------- ---------- ---------- ---------- bmy_03972T0/1-328 AEFIVLLRKP YSCGIECSVW LPFSTRGILL RFFKRIPEGT RKVNWSFRTT BACU017409/1-247 AD-------- ---------- ---------- ---------- ---------- ENSBTAP00000054552/1-354 VD-------- ---------- ---------- ---------- ---------- ENSTTRP00000010361/1-418 AD-------- ---------- ---------- ---------- ---------- 201 250 ENSP00000267339/1-420 ---------- ---------- ----LRNASG LTAADIAQTQ GFQECAQFLL bmy_03972T0/1-328 SQHVPPWGFL LSEMDRVSPE VEKGLRNASG LTAADIAQTQ GFQECTQFLL BACU017409/1-247 ---------- ---------- ----LRNASG LTAADIAQTQ GFQECTQFLL ENSBTAP00000054552/1-354 ---------- ---------- ----LRNASG LTAADIAQTQ GFQECTQFLL ENSTTRP00000010361/1-418 ---------- ---------- ----LRNASG LTAADIAQTQ GFQECTQFLL 251 300 ENSP00000267339/1-420 NLQNCHLNHF YNNGILNGGH QNVFPNHISV GTNRKRCLED SEDFGVKKAR bmy_03972T0/1-328 NLQNCHLNPF YNSGPLNGGH PNVFPNHISV GTNRKRCLED SEPFGVKKAR BACU017409/1-247 NLQNCHLNPF YNSGPLNGGH PNVFPNHISV GTNRKRCLEE SEPFGAKKAR ENSBTAP00000054552/1-354 NLQNCHLTRF GHNGTLNGGH PSVFPSHVSV GTNRKRCLED SEPFGMKKAR ENSTTRP00000010361/1-418 NLQNCHLNPF YNGGPFNGGH PNVFPNHISV GTNRKRCLED SEPFGVKKAR 301 350 ENSP00000267339/1-420 TEAQSLDSAV PLTNGDTEDD ADKMHVDREF AVV----TDM KNSSSVSNTL bmy_03972T0/1-328 TTAQSSDDPM PLLNGEAEDD ADSMHVDREF VTG------- ---------- BACU017409/1-247 TTAQSSDDPM PLVNGEAEDD ADSMHVDREF VTG------- ---------- ENSBTAP00000054552/1-354 PAAHSLDESM PLASGEVEDD PDKMHVDREL ATGVFLNADM KNSSSVSNTL ENSTTRP00000010361/1-418 TTAQSSDDPM PLLNGEAEDD ADSMHVDREF VTD------T KNSSSVSNTL 351 400 ENSP00000267339/1-420 TNGCVINGHL DFPSTTPLSG MESRNGQCLT GTNGISSGLA PGQPFPSSQG bmy_03972T0/1-328 ---------- ---------- ---------- -----GSG-- ---QFPVSRS BACU017409/1-247 ---------- ---------- ---------- -----GSG-- ---RFPVSRS ENSBTAP00000054552/1-354 TNGCVANGHL DFPSTAQPCG MESRSGQCSA GLNGVGTGLV PGLPFPSSQG ENSTTRP00000010361/1-418 TNGCLINGHL DFPSTTQLSG MESRSDQCLT GPNGIGGGLV PGPPFPSSQG 401 450 ENSP00000267339/1-420 SLCISGTEEP EKTLRANPEL CGSLHLNGSP SSCIASRPSW VEDIGDNLYY bmy_03972T0/1-328 SGPMVEDTKL QEGGSVGPKE IEIYTVSAMQ TPCRCKNQ-- ---------Y BACU017409/1-247 SGPMGEDTKQ QEGGSVGPKE IEIYTVSAMQ TPCRCKNQ-- ---------Y ENSBTAP00000054552/1-354 SPGVNGTEEP ERSTQVSPET CGSLHLNGSP SSCVASRPSW AE---ESLQY ENSTTRP00000010361/1-418 SPCVNGTEEP EKGTSVNPEM CGSLHLNGSP SSCIASRPSW VEDIGENLHY 451 500 ENSP00000267339/1-420 GHYHGFGDTA ESIPELNSVV EHSKSVKVQE RYDSAVLGTM HLHHGS bmy_03972T0/1-328 ACYF------ ---------- ---------- ---------- ------ BACU017409/1-247 ACYF------ ---------- ---------- ---------- ------ ENSBTAP00000054552/1-354 GHYHGFGDTA ESIPELSSAL EHASSVKAEQ GYHSAVLGAM HLSHGS ENSTTRP00000010361/1-418 GHYHGFGDTA ESIPELSSVI EHSNSVKLEE GHDSAVLGTM HLFHGS