KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:00 2014 Check: 00 .. Name: ENSP00000329374/1-415 Len: 426 Check: 8968 Weight: 1.00 Name: ENSBTAP00000054393/1-411 Len: 426 Check: 6037 Weight: 1.00 Name: ENSTTRP00000011039/1-412 Len: 426 Check: 7333 Weight: 1.00 Name: bmy_14275T0/1-376 Len: 426 Check: 9828 Weight: 1.00 Name: BACU010005/1-412 Len: 426 Check: 5939 Weight: 1.00 // 1 50 ENSP00000329374/1-415 --------MS PFLYLVLLVL GLHATIHCAS P---EGKVTA CHSSQPNATL ENSBTAP00000054393/1-411 --------MP LF-SLVLLIL GL----HCAP PNSCEGKITS CLSPQQNATL ENSTTRP00000011039/1-412 --------MP LFFYLVFLVL GL----HCAP PNSCEGKITS CLSPQQNATF bmy_14275T0/1-376 MCYYPPSKMP LFFYLVLLVL GL----HCAP PNSCEGKITS CLSPQQNATL BACU010005/1-412 --------MP LFFYLVLLVL GL----HCAP PNSCEGKITS CLSPQQNATL 51 100 ENSP00000329374/1-415 YKMSSINADF AFNLYRRFTV ETPDKNIFFS PVSISAALVM LSFGACCSTQ ENSBTAP00000054393/1-411 YKMSSINADF AFNLYRRFTV EIPDQNIFFS PVSISAGLAM LSLGACSSTQ ENSTTRP00000011039/1-412 YKMSSINADF AFNLYRRFTV ETPDQNIFFS PVSISAALAM LSTGACSSTQ bmy_14275T0/1-376 YKMSSINADF AFNLYRRFTV ETPDQNIFFS PVSISAALAM LSIGACSSTQ BACU010005/1-412 YKMSSINADF AFNLYRRFTM ETPDQNIFFS PVSISAALAM LSIGACSSTQ 101 150 ENSP00000329374/1-415 TEIVETLGFN LTDTPMVEIQ HGFQHLICSL NFPKKELELQ IGNALFIGKH ENSBTAP00000054393/1-411 TQILEGLGFN LTDTPVAEIQ QGFQHLICSL NFPKKELELQ MGNALFIGKQ ENSTTRP00000011039/1-412 TQILESLGFN LTDTTMAEIQ QGFQYLICSL NFPKKELELQ MGNALFIGKQ bmy_14275T0/1-376 TQILESLGFN LTDTPMAEIQ QGFQYLICSL NFPKKELELQ MGNALFIGKQ BACU010005/1-412 TQILESLGFN LTDTPMAEIQ QGFQYLICSL NFPKKELELQ MGNALFIGKQ 151 200 ENSP00000329374/1-415 LKPLAKFLND VKTLYETEVF STDFSNISAA KQEINSHVEM QTKGKVVGLI ENSBTAP00000054393/1-411 LKPLEKFLDD VKNLYETEVF STDFSNVSAA QQEINSHVEK QTKGKIVGLI ENSTTRP00000011039/1-412 LKPLAKFLDD VNNLYETEVF STNFSNVSAA QQEINSHVER KTKGKIVGLI bmy_14275T0/1-376 LKPLAKFLDD VNNLYETEVF STDFSNVSAA QQEINSHVER KTKGKIVGLI BACU010005/1-412 LKPLAKFLDD VNNLYETEVF STDFSNVSAA QQEINSHVER KTKGKIVGLI 201 250 ENSP00000329374/1-415 QDLKPNTIMV LVNYIHFKAQ WANPFDPSKT EDSSSFLIDK TTTVQVPMMH ENSBTAP00000054393/1-411 QDLKPNTITV LVNYLCFKAQ WANPFDPSKT EEGSSFLVDK TTTVQVPMMH ENSTTRP00000011039/1-412 QDLKPNTIMV LVNYIFFKAQ WANPFDPSKT EEGSSFLVDK TTTVQVPMMH bmy_14275T0/1-376 QDLKPNTIMV LVNYIYFKAQ WANPFDPSKT EEGSSFLVDK TTTVQVPMMH BACU010005/1-412 QDLKPNTIMV LVNYICLKAQ WANPFDPSKT EEGSSFLVDK TTTVQVPMMH 251 300 ENSP00000329374/1-415 QMEQYYHLVD MELNCTVLQM DYSKNALALF VLPKEGQMES VEAAMSSKTL ENSBTAP00000054393/1-411 QMEQYYHLVD TELNCTVLQM DYSKNALALF VLPKEGQMEW VEGAMSSKTL ENSTTRP00000011039/1-412 QIEQYYHLVD TELNCTVLQM DYSKNALALF VLPKEGQIEW VEGAMSSKTL bmy_14275T0/1-376 QIEQYYHLVD TELNCTVLQM DYSKNALALF VLPKEGQIEW VEGAMSSKTL BACU010005/1-412 QIEQYYHLVD TELNCTVLQM DYSKNALALF VLPKEGQIEW VEGAMSSKTL 301 350 ENSP00000329374/1-415 KKWNRLLQKG WVDLFVPKFS ISATYDLGAT LLKMGIQHAY SENADFSGLT ENSBTAP00000054393/1-411 KKWNRLLRKG WVDLFVPKFS ISATYDLGDI LLKMGIQDAF ADNADFSGLT ENSTTRP00000011039/1-412 KKWNRLLRKG WINLFVPKFS ISATYDLGAI LLKMGIQDAF ADTADFSGLT bmy_14275T0/1-376 KKWNRLLRKG WIDLF----- ---------- ---------- ---------- BACU010005/1-412 KKWNRLLRKG WIDLFVPKFS ISATYDLGAI LLKMGIQDAF ADTADFSGLT 351 400 ENSP00000329374/1-415 EDNGLKLSNA AHKAVLHIGE KGTEAAAVPE VELSDQPENT FLHPIIQIDR ENSBTAP00000054393/1-411 KDNGLKVSNV AHKAMFYIGE KGTE--AVPE VRFLNQPETT LLHPIIQFDR ENSTTRP00000011039/1-412 KDNGLKLSNA AHKAVLHIGE KGTE--AVPE VRFLNQPEIT LLHPIIQFDR bmy_14275T0/1-376 ---------A AHKAVLHIGE KGTE--AVPE VRFLNQPEIT LLRPIIQFDR BACU010005/1-412 KDNGLKLSNA AHKAVLHIGE KGTE--AVPE VRFLNQPEIA LLHPIIQFDR 401 450 ENSP00000329374/1-415 SFMLLILERS TRSILFLGKV VNPTEA ENSBTAP00000054393/1-411 SFLLLILEKN TRSILFLGKV VDPTEV ENSTTRP00000011039/1-412 SFLLLILEKN TRSILFLGKI VDPTEV bmy_14275T0/1-376 SFLLLILEKN TRSILFLGKI VDPTEV BACU010005/1-412 SFLLLILEKN TRSILFLGKI VDPTEV