KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:35 2014 Check: 00 .. Name: BACU005945/1-861 Len: 861 Check: 5727 Weight: 1.00 Name: ENSBTAP00000054153/1-278 Len: 861 Check: 7973 Weight: 1.00 Name: ENSTTRP00000014939/1-559 Len: 861 Check: 5060 Weight: 1.00 Name: bmy_13345T0/1-501 Len: 861 Check: 5670 Weight: 1.00 // 1 50 BACU005945/1-861 MDPEEEAAAL EMATGPPAER LQEPVTFRDV AVDFTQEEWG QLGPAQRTLY ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 MDPEEEAATL TMATGPPAER LQEPVTFRDV AVDFTQEEWG QLGPAQRTLY bmy_13345T0/1-501 ---------- ---------- ---------- ---------- -------SLF 51 100 BACU005945/1-861 RDVMLETFGH LLSVGPELPK PEVISQLERG AELWVAERGT AQGCCPGWEP ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 RDVMLETFGH LLSVGPELPK PEVISQLEQG AELWVAERGI AQGRCPGWES bmy_13345T0/1-501 P--------- ----GPELPK PEVISQLEQG AELWVAERGI AQGCCPGWEP 101 150 BACU005945/1-861 GPEGRAPPQE QGLPEEKGRE GFLGEAPRPA TPGEDWEREG RVQGPEKDQG ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 G-EGRAPPQE QGLPEEKGRE GFLGEALCPA TPGEDWEYEG RVQGPEKDQG bmy_13345T0/1-501 GPEGRAPPQE QGLPEEKGRE GFLGEAPCPA TPGEDWEREG RVQGPEKDQG 151 200 BACU005945/1-861 NLRQLEFSLK EALVQDGSHE SLRLGENCVL RPNPNPLAET SRTECLCAPD ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 NLRQLEFSLK EALVQGGSHE GLRLGENCVL SPNPNPLPET SRTECLCAPD bmy_13345T0/1-501 NLRQLEFSLK EALVQGGSHE SLRLGENCVL RPNPNPLAET SRTECLCAPD 201 250 BACU005945/1-861 SGLTSSQQNP SPAGERMGSL GGQLRDNSDR SNSSGQAVLE PEPEPARSQV ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 SWVTSSQQNP SAVGEQMGSL ERQPRDNSDC SNSSGQVVLE PEPEPARSQV bmy_13345T0/1-501 SGLTSSQQNP SPAGEQMCSS GRQPRDNSDR SSSSGQAILE PEPEPARSQV 251 300 BACU005945/1-861 PDKPYKCADC GKSFNHNAHL TVHRRIHTGE RPYACKECGK AFSQNSSLVQ ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---ACKECGK AFSQNSSLVQ ENSTTRP00000014939/1-559 PDKPYKCADC GKSFNHNAHL TVHRRIHTGE RPYACKECGK AFSQNSSLVQ bmy_13345T0/1-501 PDKPYKCADC GKSFNHNAHL TVHRRIHTGE RPYACKECGK AFSQNSSLVQ 301 350 BACU005945/1-861 HERIHTGHKP YKCADCGKSF CHSTHLTVHR RIHTGEKPYA CQDCGRAFNQ ENSBTAP00000054153/1-278 HERIHTGHKP YKCAECGKSF CHSTHLTVHR RIHTGEKPYA CQDCGRAFNQ ENSTTRP00000014939/1-559 HERIHTGHKP YKCADCGKSF CHSTHLTVHR RIHTGEKPYA CQDCGRAFNQ bmy_13345T0/1-501 HERIHTGHKP YKCADCGKSF CHSTHLTVHR RIHTGEKPYA CQDCGRAFNQ 351 400 BACU005945/1-861 NSSLGRHRRT HTGEKPFTCS VCGKAFSRTT CLFLHLRTHT AERPYECSRC ENSBTAP00000054153/1-278 NSSLGRHRRT HTGEKPFACS VCGKAFSRTT CLFLHLRTHT AERPYECSRC ENSTTRP00000014939/1-559 NSSLGRHRRT HTGEKPFTCS VCGKAFSRTT CLFLHLRTHT AERPYECSRC bmy_13345T0/1-501 NSSLGRHRRT HTGEKPFTCS VCGKAFSRTT CLFLHLRTHT AERPYECSRC 401 450 BACU005945/1-861 GKGFRHSSSL AQHQRKHAGE GPYDCRQRLA FEPTPAWPEP LTPGEGAPRS ENSBTAP00000054153/1-278 GKGFRHSSSL AQHQRKHAGD GPYDCRQRLL FAPAPSWPEP LSPGEGPPRS ENSTTRP00000014939/1-559 GKGFRHSSSL AQHQRKHAGE GPYDCRQRLA FEPTPAWPEP L-PLEGATRS bmy_13345T0/1-501 GKGFRHSSSL AQHQRKHAGE GPYDCRQRLA FEPTPAWPEP LTPGEGAPRS 451 500 BACU005945/1-861 DRPFRTFHNV MLSILPETVP AVPERKQAQR SRTSWSKRAS SPGHPGSMVV ENSBTAP00000054153/1-278 DRPFR----- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 DRPFR----- ---------- ---------- ---------- ---------- bmy_13345T0/1-501 DRPFR----- ---------- ---------- ---------- ---------- 501 550 BACU005945/1-861 VQTPAPEPRV FLLTLVTKSG ALKNGEFASE ARARQRGEAW YGKSGDTVVR ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 ---------- ---------- ---------- ---------- ---------- bmy_13345T0/1-501 ---------- ---------- ---------- ---------- ---------- 551 600 BACU005945/1-861 IVAGWVLGSE LSEASCKQSN SDESEPSDRA TETLVGGLSP GPTFGDAREP ENSBTAP00000054153/1-278 ---------- -----CSQ-- ---------- ---------- ---------- ENSTTRP00000014939/1-559 ---------- -----CGQ-- ---------- ---------- ---------- bmy_13345T0/1-501 ---------- -----CGQ-- ---------- ---------- ---------- 601 650 BACU005945/1-861 EGSSERQAGL SGKMWTESVT QEMDFRKTSG PHKGALTDQP GCEAGALGHS ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014939/1-559 ---------- ---------- ---------- ---------- ---------- bmy_13345T0/1-501 ---------- ---------- ---------- ---------- ---------- 651 700 BACU005945/1-861 PNVWPDFTSQ EKTPSREKVD PLDGYGASRH VLGEEALQVC ECGKAFSRSA ENSBTAP00000054153/1-278 ---------- ---------- ---------- ---------- -CGKGFTQSS ENSTTRP00000014939/1-559 ---------- ---------- ---------- ---------- -CGKCFTQSS bmy_13345T0/1-501 ---------- ---------- ---------- ---------- -CGKCFTQSS 701 750 BACU005945/1-861 HLAQHQVVHT GAKPHECKEC SKTFSRSTHL TQHRRVHTGE RAYACEECGK ENSBTAP00000054153/1-278 HLIRHQITHT REQPRG---- ---------- -RGRR----- ---------- ENSTTRP00000014939/1-559 HLIRHQITHT REDPRG---- ---------- -RGRR----- ---------- bmy_13345T0/1-501 HLIRHQITHT REEPRG---- ---------- -RGRR----- ---------- 751 800 BACU005945/1-861 AFSRLTHLTQ HQRIHTGEKP YACEKCGKTF SRSTHLTQHR CVHTGERPYA ENSBTAP00000054153/1-278 ---------- --------RP QVR------- SRGGHLGRRP LGPPEESPGG ENSTTRP00000014939/1-559 ---------- --------RP QPC------- SRSPHLGRHQ LGPTGESPGA bmy_13345T0/1-501 ---------- --------RP QPC------- GRSPHLGRHQ LGPTSESPGA 801 850 BACU005945/1-861 CEECGKAFSR STHLTQHLRV HTGERPYACE ECGKPFSQST HLTQHLCMHT ENSBTAP00000054153/1-278 GTKAGPPAGR ALALFDLHEI MQEKNPVRVI GVEEPAMSTS VL-------- ENSTTRP00000014939/1-559 GTKAGQPAGR ALALFDIHEI MQEKNPVHVI GVEEPSVGTS VL-------- bmy_13345T0/1-501 GTKAGQPAGR ALALFDIHEI MQEKNPVHVI GVEEPSVGTS VL-------- 851 900 BACU005945/1-861 GEKPYRCDAC G ENSBTAP00000054153/1-278 ----FDIRES T ENSTTRP00000014939/1-559 ----FDIRES T bmy_13345T0/1-501 ----FDIRES T