KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:19 2014 Check: 00 .. Name: ENSP00000368869/1-281 Len: 304 Check: 4875 Weight: 1.00 Name: ENSBTAP00000054024/1-171 Len: 304 Check: 1996 Weight: 1.00 Name: ENSTTRP00000005428/1-304 Len: 304 Check: 7116 Weight: 1.00 Name: bmy_16440T0/1-287 Len: 304 Check: 7862 Weight: 1.00 Name: BACU013013/1-251 Len: 304 Check: 1659 Weight: 1.00 // 1 50 ENSP00000368869/1-281 -MAQSGLTAT SASQVQAILL PQPASVRHYA W--------- ---------- ENSBTAP00000054024/1-171 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005428/1-304 MSAKSKGTPS SSSPAEGPPA ASKTKVKEQI KIIVEDLELV LGDLKDVAKE bmy_16440T0/1-287 MLQKNANELF GQPNVKAKLL ICQNSLTHFL ILIS------ ---------- BACU013013/1-251 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000368869/1-281 ---VVDQIDT LTSDLQLEDE MTDSSKTDTL NSSSSGTTAS SLEKIKVQAN ENSBTAP00000054024/1-171 --QVVDQIDT LTSDLQLEDE MTDSSKTDTL NSSSSGTTAS SIEKIKVQAN ENSTTRP00000005428/1-304 LKEVVDQIDT LTSDLQLEDE MTDSSKTDTL NSSSSGTTAS SIEKIKVQAN bmy_16440T0/1-287 -KVVVDQIDT LTSDLQLEDE MTDSSKTDTL NSSSSGTTAS SIEKIKVQAN BACU013013/1-251 ---VVDQIDT LTSDLQLEDE MTDSSKTDTL NSSSSGTTAS SIEKIKVQAN 101 150 ENSP00000368869/1-281 APLIKPPAHP SAILTVLRKP NPPPPPPRLT PVKCEDPKRV VPTANPVKTN ENSBTAP00000054024/1-171 APLIKPPAHP SAILTVLRKP NPPAPPPRLT PV-------- ---------- ENSTTRP00000005428/1-304 APLIKPPAHP SAILTVLRKP NPPPPPPRLT PVKCEDPQRV VSTVNPVKTN bmy_16440T0/1-287 APLIKPPAHP SAILTVLRKP NPPPPPPRLT PVKCEDPQRV VPTVNPVKTN BACU013013/1-251 APLIKPPAHP SAILTVLRKP NPPPPPPRLT PVKCEDPQRV VPTGNPVKTN 151 200 ENSP00000368869/1-281 GTLLRNGGLP GGPNKIPNGD ICCIPNSNLD KAPVQLLMHR PEKDRCPQAG ENSBTAP00000054024/1-171 ---------- ---------- ------NNLD KAPGQPLMHR PEKDRCPQAG ENSTTRP00000005428/1-304 GTLLRNRGFP GAPNKIPNGD VCCKPSSNLD KAPVQPLMHR PEKDRCPQAG bmy_16440T0/1-287 GTLLRSRGFP GAPNKIPNGD ICCKPSSNLD KAPVQPLMHR PEKDRCPQAG BACU013013/1-251 GTLLRSRGFP GAPNKIPNGD ICCKASSNLD KAPVQPLMHR PEKDRCPQAG 201 250 ENSP00000368869/1-281 PRERVRFNEK VQYHGYCPDC DTRYNIKNRE VHLHSEPVHP PGKIPHQGPP ENSBTAP00000054024/1-171 PRERVRFNEK VQYHGYCPDC DTRYHVKNRE VHLHSEPVHP ---------- ENSTTRP00000005428/1-304 PRERVRFNEK VQYHGYCPDC DTRHHIKNRE VHSHSEPVHP PGKLPPHGPA bmy_16440T0/1-287 PRERVRFNEK VQYHGYCPDC DTRHHIKNRE VHSHSEPVHP PGKLPPHGPA BACU013013/1-251 PRERVRFNEK VQYHGYCPDC DTRHHIKNRE VHSHSEPVHP PGKLPPHGPA 251 300 ENSP00000368869/1-281 LPPTPHLPPF PLENGGMGIS HSNSFPPIRP ATVPPPTAPK PQKTILRKST ENSBTAP00000054024/1-171 ---------- PVENGGLGIS HT-------- ---------K PQKTILRKST ENSTTRP00000005428/1-304 QPPPPHLPPF PLENGGLGIS HSNSFPPLRP APVPPPTAPK PQKTILRKST bmy_16440T0/1-287 QPPPPHLPPF PLENGGLGIS HSNSFPPLRP APVPPPTAPK PQKTILRKST BACU013013/1-251 QPPPPHLPPF PLENGGLGIS HSNSFPPLRP APVPPPTAPK PQKTILRKST 301 350 ENSP00000368869/1-281 TTTV ENSBTAP00000054024/1-171 TTTV ENSTTRP00000005428/1-304 TTTV bmy_16440T0/1-287 TTTV BACU013013/1-251 TTTV