KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:00 2014 Check: 00 .. Name: ENSTTRP00000008969/1-599 Len: 604 Check: 8096 Weight: 1.00 Name: ENSP00000369075/1-599 Len: 604 Check: 2121 Weight: 1.00 Name: BACU016894/1-201 Len: 604 Check: 9776 Weight: 1.00 Name: bmy_07684T0/1-597 Len: 604 Check: 7682 Weight: 1.00 Name: ENSBTAP00000053882/1-361 Len: 604 Check: 798 Weight: 1.00 // 1 50 ENSTTRP00000008969/1-599 MGP-KRRQLT FREKSRIIQE VEENPDLRKG EIARRFNIPP STLSTILKNK ENSP00000369075/1-599 MGP-KRRQLT FREKSRIIQE VEENPDLRKG EIARRFNIPP STLSTILKNK BACU016894/1-201 MGS------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 MGL------T FREKSRIIQE VEENPDLRKG EIARRFNIPP STLSTILKNK ENSBTAP00000053882/1-361 LGQYTTIKKT FREKSRIIQE VEENPDLRKG EIARRFNIPP STLSTILKNK 51 100 ENSTTRP00000008969/1-599 RAILASERKY GVASTCRKTN KLSPYDKLEG LLIAWFQQIR AAGLPVKGII ENSP00000369075/1-599 RAILASERKY GVASTCRKTN KLSPYDKLEG LLIAWFQQIR AAGLPVKGII BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 RAILASERKY GVASTCRKTN KLSPYDKLEG LLIAWFQQIR AAGLPVKGII ENSBTAP00000053882/1-361 RAILASERKY GVASTCRKTN KLSPYDKLEG LLIAWFQQIR AAGLPVKGII 101 150 ENSTTRP00000008969/1-599 LKEKALRIAE ELGMDDFTAS NGWLDRFRRR HGVVSCSGVA RARSRSAAPR ENSP00000369075/1-599 LKEKALRIAE ELGMDDFTAS NGWLDRFRRR HGVVSCSGVA RARARNAAPR BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 LKEKALRIAE ELGMDDFTAS NGWLDRFRRR HGVVSCSGVA RARSRSAAPR ENSBTAP00000053882/1-361 LKEKALRIAE ELGMDDFTAS NGWLDRFRRR HGVVSCSGVA RARSRSAAPR 151 200 ENSTTRP00000008969/1-599 PPAAPASPPT VPSEGSGGGT TGWRAREEQP PSVAEGYASQ DVFSATETSL ENSP00000369075/1-599 TPAAPASPAA VPSEGSGGST TGWRAREEQP PSVAEGYASQ DVFSATETSL BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 PPAAPASPPT VPSEGSGGGT TGWRAREEQP PSVAEGYASQ DVFSATETSL ENSBTAP00000053882/1-361 PPAAPASPPA VPSE------ ---------- ---------- DVFSATETSL 201 250 ENSTTRP00000008969/1-599 WYDFLPDQAA GLCGSDGRAR KATQRLSVLL CANADGSEKL PPLVAGKSAK ENSP00000369075/1-599 WYDFLPDQAA GLCGGDGRPR QATQRLSVLL CANADGSEKL PPLVAGKSAK BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 WYDFLPDQAA GLCGSDGRAR KATQRLSVLL CANADGSEKL PPLVAGKSAK ENSBTAP00000053882/1-361 WYDFLPDQAA GLCGSDGRAR RATQRLSVLL CANADGSEKL PPLVAGKSAK 251 300 ENSTTRP00000008969/1-599 PRAGQAGLPC DYTANSKGGV TTQALAKYLK ALDTRMAAES RRVLLLAGRL ENSP00000369075/1-599 PRAGQAGLPC DYTANSKGGV TTQALAKYLK ALDTRMAAES RRVLLLAGRL BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 PRAGQAGLPC DYTANSKGGV TTQALAKYLK ALDTRMAAES RRVLLLAGRL ENSBTAP00000053882/1-361 PRAGQAGLPC DYTANSKGGV TTQALAKYLK ALDTRMAAES RRVLLLAGRL 301 350 ENSTTRP00000008969/1-599 AAQSLDTSGL RHVQLAYFPP GTVQPLERAV VQQVKGHYRQ AMLLKAMVAL ENSP00000369075/1-599 AAQSLDTSGL RHVQLAFFPP GTVHPLERGV VQQVKGHYRQ AMLLKAMAAL BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 AAQSLDTSGL RHVQLAFFPP GTVQPLERGV VQQVKGHYRQ AMLLKAMAAL ENSBTAP00000053882/1-361 AAQSLDTSGL RHVQLAFFPP GTVQPLERGV VQQVKGHYRQ AMLLKAMAAL 351 400 ENSTTRP00000008969/1-599 EGQDRSGLQL GLMXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369075/1-599 EGQDPSGLQL GLTEALHFVA AAWQAVEPSD IAACFREAGF GGGPNATITT BACU016894/1-201 ---------- ---------- ---------- ---------- ---------- bmy_07684T0/1-597 EGQDRSGLQL GLMEALHFVA AAWQAVEPSD IATCFREAGF GGGPNTTITT ENSBTAP00000053882/1-361 EGQDRSGLQL GLMEALHFVA AAWQAVEPSD IAACFRE--- ---------- 401 450 ENSTTRP00000008969/1-599 XX---XXXXX XXXXXXXXXX XEEGEGEEEE EEDGEEEEEG GEGEELGEEE ENSP00000369075/1-599 SL---KSEGE EEEEEEEEEE EEEGEGEEEE EEGEEEEEEG GEGEELGEEE BACU016894/1-201 -----EEEEE EEEEEEEEEE EEEGEGEEEE EEDGEEEEEV GEGEELGEEE bmy_07684T0/1-597 ALKSEEEEEE EEEEEEEEEE EEEGEGEEEE EEDGEEEEEA GEGEELGEEE ENSBTAP00000053882/1-361 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000008969/1-599 EVEEEGDVDD SDEEEEEEEE SSSEGLEAED WAQGVVEAGG SFGGYGAQEE ENSP00000369075/1-599 EVEEEGDV-D SDEEEEEDEE SSSEGLEAED WAQGVVEAGG SFGAYGAQEE BACU016894/1-201 EVEEEGDVDD SDEEEEEEEE SSSEGLEAED WAQGVVEAGG SFGGYGAQEE bmy_07684T0/1-597 DVEEEGDVDD SDEEEEEEEE SSSEGLEAED WAQGVVEAGG SFGGYGAQEE ENSBTAP00000053882/1-361 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000008969/1-599 VQCPTLHFLE GEEDSESDSE EE-EEDDEEE DEDDEDDDED GDEVPVPSFG ENSP00000369075/1-599 AQCPTLHFLE GGEDSDSDSE EEDDEEEDDE DEDDDDDEED GDEVPVPSFG BACU016894/1-201 VQCPTLHFLE GEEDSESDSE EE-EEDDEEE DEDDEDDDED GDEVPVPSFG bmy_07684T0/1-597 VQCPTLHFLE GEEDSESDSE EE-EEDDEEE DEDDEDDDED GDEVPVPSFG ENSBTAP00000053882/1-361 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000008969/1-599 EAMAYFAMVK RYLTSFPIDD RVQSHILHLE HDLVHVTRKN HARQAGVRGL ENSP00000369075/1-599 EAMAYFAMVK RYLTSFPIDD RVQSHILHLE HDLVHVTRKN HARQAGVRGL BACU016894/1-201 EAMAYFAMVK RYLTSFPIDD RVQSHILHLE HDLVHVTRKN HARQAGVRGL bmy_07684T0/1-597 EAMAYFAMVK RYLTSFPIDD RVQSHILHLE HDLVHVTRKN HARQAGVRGL ENSBTAP00000053882/1-361 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000008969/1-599 GHQS ENSP00000369075/1-599 GHQS BACU016894/1-201 GHQS bmy_07684T0/1-597 GHQS ENSBTAP00000053882/1-361 ----