KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:04:41 2014 Check: 00 .. Name: ENSP00000363228/1-932 Len: 1040 Check: 8378 Weight: 1.00 Name: ENSBTAP00000053427/1-953 Len: 1040 Check: 9062 Weight: 1.00 Name: bmy_00592T0/1-878 Len: 1040 Check: 512 Weight: 1.00 Name: ENSTTRP00000016149/1-928 Len: 1040 Check: 4326 Weight: 1.00 // 1 50 ENSP00000363228/1-932 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000053427/1-953 ---------- ---------- ---------- ---------- ---------- bmy_00592T0/1-878 MDGRQGRMER ERGSHSVPGF APTSCRCRLR QPLEVRSPKA RAKGHCHPIG ENSTTRP00000016149/1-928 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000363228/1-932 ---------- ---------- ---------- ---MAVVIRL QGLPIVAGTM ENSBTAP00000053427/1-953 ---------- ---------- ---------- ---MAVVIRL QGLPIVAGTM bmy_00592T0/1-878 QEWSLSMGPG FRSSEESPRP GRFNPRCVWF QRSMAVVIRL QGLPIVAGTM ENSTTRP00000016149/1-928 ---------- ---------- ---------- ---MAVVIRL QGLPIVAGTM 101 150 ENSP00000363228/1-932 DIRHFFSGLT IPDGGVHIVG GELGEAFIVF ATDEDARLGM MRTGGTIKGS ENSBTAP00000053427/1-953 DIRHFFSGLT IPDGGVHIVG GELGEAFIVF ATDEDARLGM MRTGGTIKGS bmy_00592T0/1-878 DIRHFFSGLT IPDGGVHIVG GELGEAFIVF ATDEDARLGM MRTGGTIKGS ENSTTRP00000016149/1-928 DIRHFFSGLT IPDGGVHIVG GELGEAFIVF ATDEDARLGM MRTGGTIKGS 151 200 ENSP00000363228/1-932 KVTLLLSSKT EMQNMIELSR RRFETANLDI PPANASRSGP PPSSGMSSRV ENSBTAP00000053427/1-953 KVTLLLSSKT EMQNMIELSR RRFETANLDI PPANASRSGP PPSSGMSGRV bmy_00592T0/1-878 KVTLLLSSKT EMQNMIELSR RRFETANLDI PPANASRSGP PPSSGMSGRV ENSTTRP00000016149/1-928 KVTLLLSSKT EMQNMIELSR RRFETANLDI PPANASRSGP PPSSGMSGRV 201 250 ENSP00000363228/1-932 NLPTTVSNFN NPSPSVVTAT TSVHESNKNI QTFSTASVGT APPNMGASFG ENSBTAP00000053427/1-953 NLPTTVPNFN NPSPSVVTAT TSVHESSKNI QTFSTASIGT APPNMGASFG bmy_00592T0/1-878 NLPTTVPNFN NPSPSVVTAA TSVHESNKNV QTFSTASIGT APPNMGASFG ENSTTRP00000016149/1-928 NLPTTVPNFN NPSPSVVTAA TSVHESNKNV QTFSTASIGT APPNMGASFG 251 300 ENSP00000363228/1-932 SPTFSSTVPS TASPMNTVPP PPIPPIPAMP SLPPMPSIPP IPVPPPVPTL ENSBTAP00000053427/1-953 SPTFSSTVPS TASPMNTVPP PPIPPIPAMP SLPPMPSIPP IPVPPPVPTM bmy_00592T0/1-878 SPTFSSTIPS TASPMNTVPP PPIPPIPAMP SLPPMPSIPP IPVPPPVPTL ENSTTRP00000016149/1-928 SPTFSSTIPS TASPMNTVPP PPIPPIPAMP SLPPMPSIPP IPVPPPVPTL 301 350 ENSP00000363228/1-932 PPVPPVPPIP PVPSVPPMTP LPPMSGMPPL NPPPVAPLPA GMNGSGAPMN ENSBTAP00000053427/1-953 PPVPPVPPIP PVPSVPPMTP LPPMSGMPPL NPPPVAPLPA GMNGSGAPVN bmy_00592T0/1-878 PPVPPVPPIP PVPSVPPMTP LPPMSGMPPL NPPPVAPLPA GMNGSGAPMN ENSTTRP00000016149/1-928 PPVPPVPPIP PVPSVPPMTP LPPMSGMPPL NPPPVAPLPA GMNGSGAPMN 351 400 ENSP00000363228/1-932 LNNNLNPMFL GPLNPVNPIQ MNSQSSVKPL PINPDDLYVS VHGMPFSAME ENSBTAP00000053427/1-953 LNNNLNPVFL GPLNPVNPVQ MNSQSSVKPL PINPDDLYVS VHGMPFSAME bmy_00592T0/1-878 LNNNLNPVFL GPLNPVNPIQ MNSQSSVKPL PINPDDLYVS VHGMPFSAME ENSTTRP00000016149/1-928 LNNNLNPVFL GPLNPVNPIQ MNSQSSVKPL PINPDDLYVS VHGMPFSAME 401 450 ENSP00000363228/1-932 NDVRDFFHGL RVDAVHLLKD HVGRNNGNGL VKFLSPQDTF EALKRNRMLM ENSBTAP00000053427/1-953 NDVRDFFHGL RVDAVHLLKD HVGRNNGNGL VKFLSPQDTF EALKRNRMLM bmy_00592T0/1-878 NDVRDFFHGL RVDAVHLLKD HVGRNNGNGL VKFLSPQDTF EALKRNRMLM ENSTTRP00000016149/1-928 NDVRDFFHGL RVDAVHLLKD HVGRNNGNGL VKFLSPQDTF EALKRNRMLM 451 500 ENSP00000363228/1-932 IQRYVEVSPA TERQWVAAGG HITFKQNMGP SGQTHPPPQT LPRSKSPSGQ ENSBTAP00000053427/1-953 IQRYVEVSPA TERQWVAAGG HITFKQSIGP SGQTHPPPQP LPRSKSPSGQ bmy_00592T0/1-878 IQRYVEVSPA TERQWVAAGG HITFKQSIGP SGQTHPPPQA LPRSKSPSGQ ENSTTRP00000016149/1-928 IQRYVEVSPA TERQWVAAGG HITFKQSIGP SGQNHPPPQA LPRSKSPSGQ 501 550 ENSP00000363228/1-932 KRSRSRSPHE AGFCVYLKGL PFEAENKHVI DFFKKLDIVE DSIYIAYGPN ENSBTAP00000053427/1-953 KRSRSRSPHE AGFCVYLKGL PFEAENKHVI DFFKKLDIVE DSIYIAYGPN bmy_00592T0/1-878 KRSRSRSPHE AGFCVYLKGL PFEAENKHVI DFFKKLDIVE DSIYIAYGPN ENSTTRP00000016149/1-928 KRSRSRSPHE AGFCVYLKGL PFEAENKHVI DFFKKLDIVE DSIYIAYGPN 551 600 ENSP00000363228/1-932 GKATGEGFVE FRNEADYKAA LCRHKQYMGN RFIQVHPITK KGMLEKIDMI ENSBTAP00000053427/1-953 GKATGEGFVE FRNEADYKAA LCRHKQYMGN RFIQVHPITK KGMLEKIDMI bmy_00592T0/1-878 GKATGEGFVE FRNEADYKAA LCRHKQYMGN RFIQVHPITK KGMLEKIDMI ENSTTRP00000016149/1-928 GKATGEGFVE FRNEADYKAA LCRHKQYMGN RFIQVHPITK KGMLEKIDMI 601 650 ENSP00000363228/1-932 RKRLQNFSYD QREMILNPEG DVNSAKVCAH ITNIPFSITK MDVLQFLEGI ENSBTAP00000053427/1-953 RKRLQNFSYD QREMILNPEG DVTSAKVCAH ITNIPFSITK MDVLQFLEGI bmy_00592T0/1-878 RKRLQNFSYD QREMMINPEG DVTSAKVCAH ITNIPFSITK MDVLQFLEGI ENSTTRP00000016149/1-928 RKRLQNFSYD QREMMLNPEG DVTSAKVCAH ITNIPFSITK MDVLQFLEGI 651 700 ENSP00000363228/1-932 PVDENAVHVL VDNNGQGLGQ ALVQFKNEDD ARKSERLHRK KLNGREAFVH ENSBTAP00000053427/1-953 PVDENAVHVL VDNNGQGLGQ ALVQFKNEDD ARKSERLHRK KLNGREAFVH bmy_00592T0/1-878 PVDENAVHVL VDNNGQGLGQ ALVQFKNEDD ARKSERLHR- ---------- ENSTTRP00000016149/1-928 PVDENAVHVL VDNNGQGLGQ ALVQFKNEDD ARKSERLHRK KLNGREAFVH 701 750 ENSP00000363228/1-932 VVTLEDMREI EKNPPAQGKK GLKMPVPGNP AVP------- ---------- ENSBTAP00000053427/1-953 VVTLEDMREI EKNPPAQGKK GLKMSVPGNP AVPGIPNVGM PNAGLPSSGM bmy_00592T0/1-878 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016149/1-928 VVTLEDMREI EKNPPAQGKK GLKMPVPGNP AVP------- ---------- 751 800 ENSP00000363228/1-932 --------GM PNAGLPGVGL PSAGLPGAGL PSTGLPGSAI TSAGLPGAGM ENSBTAP00000053427/1-953 PSAGLPNAGM PNAGIPAAGM PNAGMPAAGM PNAGIPSAGM PAAGMPGVGM bmy_00592T0/1-878 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016149/1-928 --------GI PSVGMPSAGM PNAGMPNTGM PNAGMPGAGM PGVGIPSAGM 801 850 ENSP00000363228/1-932 PSAGIPSAGG EEHAFLTVGS KEANNGPPFN FPGNFGGSNA FGPPIPPPGL ENSBTAP00000053427/1-953 PGAGMPSAGG EEHAFLAVGS KEANSGPPFN FPGNFGGSNA FGPPLPPPGL bmy_00592T0/1-878 ---------- ---------- ---------- ---------- ---------L ENSTTRP00000016149/1-928 PTAGMPSAGG EEHAFLTVGS KEANNGPPFN FPGNFGGSNA FGPPLPPPGL 851 900 ENSP00000363228/1-932 GGGAFGDARP GMPSVGNSGL PGLGLDVPGF GGGPNNLSGP SGFGGGPQNF ENSBTAP00000053427/1-953 G-GAFGDARP GMPSVGNSGL PGLGLDVPGF GGGPNNLSGP -GFGGGPQNF bmy_00592T0/1-878 G-GAFGDARP GMPSVGNSGL PGLGLDVPGF GGGPNNLSGP -GFGGGPQNF ENSTTRP00000016149/1-928 G-GAFGDARP GMPSVGNSGL PGLGLDVPGF GGGPNNLSGP -GFGGGPQNF 901 950 ENSP00000363228/1-932 GNGPGSLGGP PGFGSGPPGL GSAPGHLGGP PAFGPGPGPG PGPGPIHIGG ENSBTAP00000053427/1-953 GNGPGSLGGP PGFGSGPPGL GNAPGHLSGP PAF--GPGPG PGPGPIHIGG bmy_00592T0/1-878 GNGPGSLGGP PGFGSGPPGL GSAPGHLSGP PAFGPGPGPG PGPGPVHVGG ENSTTRP00000016149/1-928 GNGPGSLGGP PGFGSGPPGL GSAPGHLSGP PAF--GPGPG PGPGPVHVGG 951 1000 ENSP00000363228/1-932 PPGFASSSGK PGPTVIKVQN MPFTVSIDEI LDFFYGYQVI PGSVCLKYNE ENSBTAP00000053427/1-953 PPGFGSSSGK PGPTIIKVQN MPFTVSIDEI LDFFYGYQVI PGSVCLKYNE bmy_00592T0/1-878 PPGFGSSSGK PGPTVIKVQN MPFTVSIDEI LDFFYGYQVI PGSVCLKYNE ENSTTRP00000016149/1-928 PPGFGSSSGK PGPTVIKVQN MPFTVSIDEI LDFFYGYQVI PGSVCLKYNE 1001 1050 ENSP00000363228/1-932 KGMPTGEAMV AFESRDEATA AVIDLNDRPI GSRKVKLVLG ENSBTAP00000053427/1-953 KGMPTGEAMV AFESRDEATA AVIDLNDRPI GSRKVKLVLG bmy_00592T0/1-878 KGMPTGEAMV AFESRDEATA AVIDLNDRPI GSRKVKLVLG ENSTTRP00000016149/1-928 KGMPTGEAMV AFESRDEATA AVIDLNDRPI GSRKVKLVLG