KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:27 2014 Check: 00 .. Name: ENSP00000250448/1-472 Len: 519 Check: 3675 Weight: 1.00 Name: ENSBTAP00000053401/1-468 Len: 519 Check: 4551 Weight: 1.00 Name: bmy_03855T0/1-465 Len: 519 Check: 3929 Weight: 1.00 Name: BACU007375/1-512 Len: 519 Check: 3192 Weight: 1.00 Name: ENSTTRP00000002678/1-442 Len: 519 Check: 3282 Weight: 1.00 // 1 50 ENSP00000250448/1-472 ---------- ---------- ---------- ---------- ------MLGT ENSBTAP00000053401/1-468 ---------- ---------- ---------- ---------- ------MLGT bmy_03855T0/1-465 ---------- ---------- ---------- ---------- ------MLGA BACU007375/1-512 MPAETGFFPC RARQLFAGSG EGARRFAPGG ESYALQKCSP LVFGFAPAGR ENSTTRP00000002678/1-442 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000250448/1-472 VKMEGHETSD WNSYYADTQE AYSSVPVSNM NSGLGSMNSM NTYMTMNTMT ENSBTAP00000053401/1-468 VKMEGHESSD WNSYYADTQE AYSSVPVSNM NSGLGTMNSM NTYMTMNTMS bmy_03855T0/1-465 VKMEGHESSD WNSYYADTQE AYSSVPVSNM NSGLGTMNSM NTYMTMNTMT BACU007375/1-512 PPAPTTNSAL RGLFTLSPLQ AYSSVPVSNM NSGLGTMNSM NTYMTMNTMT ENSTTRP00000002678/1-442 ---------- ---------- AYNSVPVSNM NSGLGTMNSM NTYMTMNTMT 101 150 ENSP00000250448/1-472 TSGNMTPASF NMSYANPGLG AGLSPGAVAG MPGGSAGAMN SMTAAGVTAM ENSBTAP00000053401/1-468 TSGNMTPASF NMSYANPGLG AGLSPGAVAG MPGGSAGAMN SMT-AGVTAM bmy_03855T0/1-465 TSGNMTPASF NMSYANPGLG AGLSPGAVAG MPGGSAGAMN TMT-AGVTAM BACU007375/1-512 TSGNMTPASF NMSYANPGLG AGLSPGAVAG MPGGSAGAMN TMT-AGVTAM ENSTTRP00000002678/1-442 TSGNMTPASF NMSYANPGLG AGLSPGAVAG MPGGSAGAMN TMT-AGVTAM 151 200 ENSP00000250448/1-472 GTALSPSGMG AMGAQQAASM NGLGPYAAAM NPCMSPMAYA PSNLGRSR-A ENSBTAP00000053401/1-468 GTTLSPGGMG AMGAQPAASM NGLGPYAAAM NPCMSPMAYA PSNLGRSRAA bmy_03855T0/1-465 GTTLSPGGMG AMGAQPAASM NGLGPYAAAM NPCMSPMAYA PSNLGRSR-A BACU007375/1-512 GTTLSPGGMG AMGAQPAASM NGLGPYAAAM NPCMSPMAYA PSNLGRSR-A ENSTTRP00000002678/1-442 GTTLSPGGMG AMGAQPAASM NGLGPYAAAM NPCMSPMAYA PSNLGRSR-A 201 250 ENSP00000250448/1-472 GGGGDAKTFK RSYPHAKPPY SYISLITMAI QQAPSKMLTL SEIYQWIMDL ENSBTAP00000053401/1-468 GGGGDAKTFK RSYPHAKPPY SYISLITMAI QQAPSKMLTL SEIYQWIMDL bmy_03855T0/1-465 GGGGDAKTFK RSYPHAKPPY SYISLITMAI QQAPSKMLTL SEIYQWIMDL BACU007375/1-512 GGGGDAKTFK RSYPHAKPPY SYISLITMAI QQAPSKMLTL SEIYQWIMDL ENSTTRP00000002678/1-442 GGGGDAKTFK RSYPHAKPPY SYISLITMAI QQAPSKMLTL SEIYQWIMDL 251 300 ENSP00000250448/1-472 FPYYRQNQQR WQNSIRHSLS FNDCFVKVAR SPDKPGKGSY WTLHPDSGNM ENSBTAP00000053401/1-468 FPYYRQNQQR WQNSIRHSLS FNDCFVKVAR SPDKPGKGSY WTLHPDSGNM bmy_03855T0/1-465 FPYYRQNQQR WQNSIRHSLS FNDCFVKVAR SPDKPGKGSY WTLHPDSGNM BACU007375/1-512 FPYYRQNQQR WQNSIRHSLS FNDCFVKVAR SPDKPGKGSY WTLHPDSGNM ENSTTRP00000002678/1-442 FPYYRQNQQR WQNSIRHSLS FNDCFVKVAR SPDKPGKGSY WTLHPDSGNM 301 350 ENSP00000250448/1-472 FENGCYLRRQ KRFKCEKQPG AGGGGGSGSG GSGAKGGPES RKDPSGASNP ENSBTAP00000053401/1-468 FENGCYLRRQ KRFKCEKQPG PGGGG----G GGGPKGGPES RKDPSSAANP bmy_03855T0/1-465 FENGCYLRRQ KRFKCEKQPG TGGG-----S GGGAKGGPES RKDPSSAANP BACU007375/1-512 FENGCYLRRQ KRFKCEKQPG TGGG-----S GGGAKGGPES RKDPSSAANP ENSTTRP00000002678/1-442 FENGCYLRRQ KRFKCEKQPG TGGG-----S GGGAKGGPES RKDPSSAANP 351 400 ENSP00000250448/1-472 SADSPLHRGV HGKTGQLEGA PAPGPAASPQ TLDHSGATAT GGASELKTPA ENSBTAP00000053401/1-468 SADSPLHRGV HGKAGQLEGA PAPGPAASPQ TLDHGGAAAT GGASELKTPA bmy_03855T0/1-465 SADSPLHRGV HSKAGQLEGA PAPGPAASPQ TLDHSGAAAT GGASELKTPA BACU007375/1-512 SADSPLHRGV HSKAGQLEGA PAPGPAASPQ TLDHSGAAAT GGASELKTPA ENSTTRP00000002678/1-442 SADSPLRRGV HSKAGQLEGA PAPGPAASPQ TLDHSGAAAT GGASELKTPA 401 450 ENSP00000250448/1-472 SSTAPPISSG PGALASVPAS HPAHGLAPHE SQLHLKGDPH YSFNHPFSIN ENSBTAP00000053401/1-468 TSAAPPISSG PGALVSVPPS HPAHALAPHE SQLHMKGDPH YSFNHPFSIN bmy_03855T0/1-465 SSAAPPISSG PAALVSVPPS HPAHGLAPHE SQLHLKGDPH YSFNHPFSIN BACU007375/1-512 SSAAPPISSG PGALVSVPPS HPAHGLAPHE SQLHLKGDPH YSFNHPFSIN ENSTTRP00000002678/1-442 SSAAPPISSG PGALVSVPPS HPAHGLAPHE SQLHLKGDPH YSFNHPFSIN 451 500 ENSP00000250448/1-472 NLMSSSEQQH KLDFKAYEQA LQYSPYGSTL PASLPLGSAS VTTRSPIEPS ENSBTAP00000053401/1-468 NLMSSSEQQH KLDFKAYEQA LQYSPYGSAL PASLPLGGAS VATRSPIEPS bmy_03855T0/1-465 NLMSSSE-QH KLDFKSYEQA LQYSPYGTAL PASLPLGSAS VATRSPIEPS BACU007375/1-512 NLMSSSEQQH KLDFKSYEQA LQYSPYGTAL PASLPLGSAS VATRSPIEPS ENSTTRP00000002678/1-442 NLMSSSEQQH KLDFKSYEQA LQYSPYGTAL PASLPLGSAS VATRSPIEPS 501 550 ENSP00000250448/1-472 ALEPAYYQGV YSRPVLNTS ENSBTAP00000053401/1-468 ALEPAYYQGV YSRPVLNTS bmy_03855T0/1-465 ALEPAYYQGV YSRPVLNTS BACU007375/1-512 ALEPAYYQGV YSRPVLNTS ENSTTRP00000002678/1-442 ALEPAYYQGV YSRPVLNTS