KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:04:25 2014 Check: 00 .. Name: ENSTTRP00000013564/1-567 Len: 655 Check: 4321 Weight: 1.00 Name: ENSP00000019317/1-655 Len: 655 Check: 6377 Weight: 1.00 Name: ENSBTAP00000053388/1-635 Len: 655 Check: 1284 Weight: 1.00 Name: bmy_14056T0/1-627 Len: 655 Check: 8570 Weight: 1.00 Name: BACU017057/1-635 Len: 655 Check: 1737 Weight: 1.00 // 1 50 ENSTTRP00000013564/1-567 MTECFLPPTS SPGEHRRVEH GSGLTRTPSS EEISPTKFPG LYRTGEPSPP ENSP00000019317/1-655 MTECFLPPTS SPSEHRRVEH GSGLTRTPSS EEISPTKFPG LYRTGEPSPP ENSBTAP00000053388/1-635 MTECFLPPTS SPSEHRRVEH GSGLTRTPSS EEISPTKFPG LYRTGEPSPP bmy_14056T0/1-627 MTECFLPPTS SPGEHRRVEH GSGLTRTPSS EEISPTKFPG LYRTGEPSPP BACU017057/1-635 MTECFLPPTS SPGEHRRVEH GSGLTRTPSS EEISPTKFPG LYRTGEPSPP 51 100 ENSTTRP00000013564/1-567 HDSLHEPPDI VSDDEKDHGK KKGKFKKKEK RTEGYAAFQE DSSGDEAESP ENSP00000019317/1-655 HDILHEPPDV VSDDEKDHGK KKGKFKKKEK RTEGYAAFQE DSSGDEAESP ENSBTAP00000053388/1-635 HDSLHEPPDV VSDDEKDHGK KKGKFKKKEK RTEGYAAFQE DSSGDEAESP bmy_14056T0/1-627 HDSLHEPPDI VSDDEKDHGK KKGKFKKKEK RTEGYAAFQE DSSGDEAESP BACU017057/1-635 HDSLHEPPDI VSDDEKDHGK KKGKFKKKEK RTEGYAAFQE DSSGDEAESP 101 150 ENSTTRP00000013564/1-567 SKMKRSKGIH VFKKPSFSKK KEKDFKIKEK PKEEKHKEEK HKEEKHKEKK ENSP00000019317/1-655 SKMKRSKGIH VFKKPSFSKK KEKDFKIKEK PKEEKHKEEK HKEEKHKEKK ENSBTAP00000053388/1-635 SKMKRSKGIH VFKKPSFSKK KEKDFKIKEK PKEEKHKEEK HKEEKHKEKK bmy_14056T0/1-627 SKMKRSKGIH VFKKPSFSKK KEKDFKIKEK PKEEKHKEEK HKEEKHKEKK BACU017057/1-635 SKMKRSKGIH VFKKPSFSKK KEKDFKIKEK PKEEKHKEEK HKEEKHKEKK 151 200 ENSTTRP00000013564/1-567 SKDLTAADVV KQWKEKKKKK KPIQEPEVPQ IDVPNLKPIF GIPLADAVER ENSP00000019317/1-655 SKDLTAADVV KQWKEKKKKK KPIQEPEVPQ IDVPNLKPIF GIPLADAVER ENSBTAP00000053388/1-635 SKDLTAADVV KQWKEKKKKK KPIQEPEVPQ LDVPSLRPIF GIPLADAVER bmy_14056T0/1-627 SKDLTAADVV KQWKEKKKKK KPIQEPEVPQ IDVPNLKPIF GIPLADAVER BACU017057/1-635 SKDLTAADVV KQWKEKKKKK KPIQEPEVPQ IDVPNLKPIF GIPLADAVER 201 250 ENSTTRP00000013564/1-567 TMMYDGVRLP AVFRECVDYV EKHGMKCEGI YRVSGIKSKV DELKAAYDRE ENSP00000019317/1-655 TMMYDGIRLP AVFRECIDYV EKYGMKCEGI YRVSGIKSKV DELKAAYDRE ENSBTAP00000053388/1-635 TMMYDGVRLP AVFRECVDYV EKHGMKCEGI YRVSGIKSKV DELKAAYDRE bmy_14056T0/1-627 TMMYDGVRLP AVFRECVDYV EKHGMKCEGI YRVSGIKSKV DELKAAYDRE BACU017057/1-635 TMMYDGVRLP AVFRECVDYV EKHGMKCEGI YRVSGIKSKV DELKAAYDRE 251 300 ENSTTRP00000013564/1-567 ESPNLEEYEP NTVASLLKQY LRDLPENLLT KELLPRFEEA CGRSSEGEKV ENSP00000019317/1-655 ESTNLEDYEP NTVASLLKQY LRDLPENLLT KELMPRFEEA CGRTTETEKV ENSBTAP00000053388/1-635 ESPNLEEYEP NTVASLLKQY LRDLPENLLT KELLPRFEEA CGRSSEAEKV bmy_14056T0/1-627 ESPNLEEYEP NTVASLLKQY LRDLPENLLT KELLPRFEEA CGRSSEGEKV BACU017057/1-635 ESPNLEEYEP NTVASLLKQY LRDLPENLLT KELLPRFEEA CGRSSEGEKV 301 350 ENSTTRP00000013564/1-567 QEFQRLLEEL PECNRLLISW LIMHMDHVIA KELETKMNIQ NISIVLSPTV ENSP00000019317/1-655 QEFQRLLKEL PECNYLLISW LIVHMDHVIA KELETKMNIQ NISIVLSPTV ENSBTAP00000053388/1-635 QEFQRLLEDL PECSRLLISW LIVHMDHVIA KELETKMNIQ NISIVLSPTV bmy_14056T0/1-627 QEFQRLLEEL PECNRLLISW LIVHMDHVIA KELETKMNIQ NISIVLSPTV BACU017057/1-635 QEFQRLLEEL PECNRLLISW LIVHMDHVIA KELETKMNIQ NISIVLSPTV 351 400 ENSTTRP00000013564/1-567 QISNRVLYVF FTHVQELFGN VTLKQVTKPL RWSNMATMPT LPETQESIKE ENSP00000019317/1-655 QISNRVLYVF FTHVQELFGN VVLKQVMKPL RWSNMATMPT LPETQAGIKE ENSBTAP00000053388/1-635 QISNRVLYVF FTHVQELFGN VTLKQVTKPL RWSNMATMPT LPETQESIKE bmy_14056T0/1-627 QISNRVLYVF FTHVQELFGN VTLKQVTKPL RWSNMATMPT LPETQESIKE BACU017057/1-635 QISNRVLYVF FTHVQELFGN VTLKQVTKPL RWSNMATMPT LPETQESIKE 401 450 ENSTTRP00000013564/1-567 EIRRQXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE ENSP00000019317/1-655 EIRRQEFLLN CLHRDLQGGI KDLSKEERLW EVQRILTALK RKLREAKRQE ENSBTAP00000053388/1-635 EIRRQEFLLN CLHRDLQGGI KDLSKEERLW EVQRILTALK RKLREAKRQE bmy_14056T0/1-627 EIRRQEFLLN CLHRDLQGGI KDLSKEERLW EVQRILTALK RKLREAKRQE BACU017057/1-635 EIRRQEFLLN CLHRDLQGGI KDLSKEERLW EVQRILTALK RKLREAKRQE 451 500 ENSTTRP00000013564/1-567 CETKIAQEIA SLSKEDVSKE EMNENEEVIN ILLAQENEIL TEQEELLAME ENSP00000019317/1-655 CETKIAQEIA SLSKEDVSKE EMNENEEVIN ILLAQENEIL TEQEELLAME ENSBTAP00000053388/1-635 CETKIAQEIA SLSKEDVSKE EMNENEEVIN ILLAQENEIL TEQEELLAME bmy_14056T0/1-627 CETKIAQEIA SLSKEDVSKE EMNENEE--- -----ENEIL TEQEELLAME BACU017057/1-635 CETKIAQEIA SLSKEDVSKE EMNENEEVIN ILLAQENEIL TEQEELLAME 501 550 ENSTTRP00000013564/1-567 QFLRRQIASE KEEMERLRAE IAEIQSRQQH GRSETEEYSS ESESESEDED ENSP00000019317/1-655 QFLRRQIASE KEEIERLRAE IAEIQSRQQH GRSETEEYSS ESESESEDEE ENSBTAP00000053388/1-635 QFLRRQIASE KEEIERLRAE IAEIQSRQQH GRSETEEYSS DSESESEDED bmy_14056T0/1-627 QFLRRQIASE KEEMERLRAE IAEIQSRQQH GRSETEEYSS ESESESEDED BACU017057/1-635 QFLRRQIASE KEEMERLRAE IAEIQSRQQH GRSETEEYSS ESESESEDED 551 600 ENSTTRP00000013564/1-567 ELQLILQDLQ RQNEELE--- ---------- ---------- ---------- ENSP00000019317/1-655 ELQIILEDLQ RQNEELEIKN NHLNQAIHEE REAIIELRVQ LRLLQMQRAK ENSBTAP00000053388/1-635 ELQLILQDLQ RQNEELEIKN NHLNQAIHEE REAIIELRVQ LRLLQLQRAR bmy_14056T0/1-627 ELQLILQDLQ RQNEELEIKN NHLNQAIHEE REAIIELRVQ LRLLQLQRAR BACU017057/1-635 ELQLILQDLQ RQNEELEIKN NHLNQAIHEE REAIIELRVQ LRLLQLQGAR 601 650 ENSTTRP00000013564/1-567 ---------- ---------- ---------- ---------- ---------- ENSP00000019317/1-655 AEQQAQEDEE PEWRGGAVQP PRDGVLEPKA AKEQPKAGKE PAKPSPSRDR ENSBTAP00000053388/1-635 PEPLAEPE-- ---------- --------PG AREPPPPTKE QARPSPGRER bmy_14056T0/1-627 PEPPAESE-- ---------- --------PV ARELPPGGKE QPRPSPSRDR BACU017057/1-635 PEPQAEPE-- ---------- --------PV AREPPPGGKE QPRPSPSRDR 651 700 ENSTTRP00000013564/1-567 ----- ENSP00000019317/1-655 KETSI ENSBTAP00000053388/1-635 KETPI bmy_14056T0/1-627 KETPI BACU017057/1-635 KETPI