KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:22 2014 Check: 00 .. Name: bmy_16460T0/1-373 Len: 797 Check: 832 Weight: 1.00 Name: ENSP00000470152/1-724 Len: 797 Check: 6674 Weight: 1.00 Name: ENSBTAP00000053274/1-743 Len: 797 Check: 9867 Weight: 1.00 Name: BACU001586/1-730 Len: 797 Check: 5858 Weight: 1.00 Name: ENSTTRP00000005418/1-743 Len: 797 Check: 8999 Weight: 1.00 // 1 50 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL ENSBTAP00000053274/1-743 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL BACU001586/1-730 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL ENSTTRP00000005418/1-743 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL 51 100 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 HLVDIWNVIE ALRENALNNL DPNTELNVSR LEAVLSTIFY QLNKRMPTTH ENSBTAP00000053274/1-743 HLVDIWNVIE ALRENALNNV DPNMELNVAR LEAVLSTIFY QLNKRMPTTH BACU001586/1-730 HLVDIWNVIE ALRENGLNNV DPNIELNVAR LEAVLSTIFY QLNKRMPTTH ENSTTRP00000005418/1-743 HLVDIWNVIE ALRENGLNNV DPNIELNVAR LEAVLSTIFY QLNKRMPTTH 101 150 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 QIHVEQSISL LLNFLLAAFD PEGHGKISVF AVKMALATLC GGKIMDKLRY ENSBTAP00000053274/1-743 QIQVEQSISL LLNFLLAAFD PEGHGKISVF AVKMALATLC GGKIMDKLRY BACU001586/1-730 QIQVEQSISL LLNFLLAAFD PEGHGKISVF AVKMALATLC GGKIMDKLRY ENSTTRP00000005418/1-743 QIQVEQSISL LLNFLLAAFD PEGHGKISVF AVKMALATLC GGKIMDKLRY 151 200 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 IFSMISDSSG VMVYGRYDQF LREVLKLPTA VFEGPSFGYT EQSARSCFSQ ENSBTAP00000053274/1-743 IFSMISDSSG VMVYGRYDQF LREVLKLPTA VFEGPSFGYT EQSARSCFSQ BACU001586/1-730 IFSMISDSSG VMVYGRYDQF LREVLKLPTA VFEGPSFGYT EQSARSCFSQ ENSTTRP00000005418/1-743 IFSMISDSSG VMVYGRYDQF LREVLKLPTA VFEGPSFGYT EQSARSCFSQ 201 250 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP VECSYCHSES ENSBTAP00000053274/1-743 QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP VECSYCHSES BACU001586/1-730 QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP VECSYCHSES ENSTTRP00000005418/1-743 QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP VECSYCHSES 251 300 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT ENSBTAP00000053274/1-743 MLGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT BACU001586/1-730 MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT ENSTTRP00000005418/1-743 MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT 301 350 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIV---PPR PVTSMNDTLF ENSBTAP00000053274/1-743 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIVDTWPPR PVTSMNDTLF BACU001586/1-730 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIV------ ---------- ENSTTRP00000005418/1-743 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIVMYMPPR PVTSMNDSMF 351 400 bmy_16460T0/1-373 ---------- ---------- ---------- ---------- ---------- ENSP00000470152/1-724 SHSVPSSGSP FITRS----- ---------- ---------- ---------- ENSBTAP00000053274/1-743 SHSVPSSGSP FITRSSPPKD SEVEQSKLLA RAAPALLKGK GIKYSLNVAD BACU001586/1-730 ---------- -----SPPKD SEVEQSKLLA RAAPALLKGK GIQY------ ENSTTRP00000005418/1-743 SHSVPSSGSP FITRSSPPKD SEVEQSKLLA RAAPALLKGK GIQYSLNVAD 401 450 bmy_16460T0/1-373 ---------- ---------- --MLESSTRL DEEHRLIARY AARLAAEST- ENSP00000470152/1-724 ---------- ---------- --MLESSNRL DEEHRLIARY AARLAAESS- ENSBTAP00000053274/1-743 RLADEHVLIG LYVNMLRNNP SCMLESSNRL DEEHRLIARY AARLAAEST- BACU001586/1-730 ---------- ---------- --SLNVADRL ADEHVLIGLY VNMLRNNPSW ENSTTRP00000005418/1-743 RLADEHVLIG LYVNMLRNNP SCMLESSTRL DEEHRLIARY AARLAAEST- 451 500 bmy_16460T0/1-373 -SSQPAQQRS APDISFTIDA NKQQRQLIAE LENKNREILQ EIQRLRLEHE ENSP00000470152/1-724 -SSQPPQQRS APDISFTIDA NKQQRQLIAE LENKNREILQ EIQRLRLEHE ENSBTAP00000053274/1-743 -SSQPTQQRS APDISFTIDA NKQQRQLIAE LENKNREILQ EIQRLRLEHE BACU001586/1-730 LVQQPVQQRS APDISFTIDA NKQQRQLIAE LENKNREILQ EIQRLRLEHE ENSTTRP00000005418/1-743 -SSQPAQQRS APDISFTIDA NKQQRHLIAE LENKNREILQ EIQRLRLEHE 501 550 bmy_16460T0/1-373 QASQPTPEKA QQNPTLLAEL RLLRQRKDEL EQRMSALQES RRELMVQLEG ENSP00000470152/1-724 QASQPTPEKA QQNPTLLAEL RLLRQRKDEL EQRMSALQES RRELMVQLEG ENSBTAP00000053274/1-743 QASQPTPEKA QQNPTLLAEL RLLRQRKDEL EQRMSALQES RRELMVQLEG BACU001586/1-730 QASQPTPEKA QQNPTLLAEL RLLRQRKDEL EQRMSALQES RRELMVQLEG ENSTTRP00000005418/1-743 QASQPTPEKA QQNPTLLAEL RLLRQRKDEL EQRMSALQES RRELMVQLEG 551 600 bmy_16460T0/1-373 LMKLLKTQGA GSPRSSPSHT ISRPIPMPVR SASACSTPTH TPQDSLTGVG ENSP00000470152/1-724 LMKLLKTQGA GSPRSSPSHT ISRPIPMPIR SASACSTPTH TPQDSLTGVG ENSBTAP00000053274/1-743 LMKLLKTQGA GSPRSSPSHT ISRPIPMPVR SASACSTPTP TPQDSLTGVG BACU001586/1-730 LMKLLKTQGA GSPRSSPSHT ISRPIPMPVR SASACSTPTH TPQDSLTGVG ENSTTRP00000005418/1-743 LMKLLKTQGA GSPRSSPSHT ISKPIPMPVR SASACSTPTH TPQDSLTGVG 601 650 bmy_16460T0/1-373 GDVQEAFAQS SRRNLRNDLL VAADSITNTM SSLVKELNSE AGSETESNVD ENSP00000470152/1-724 GDVQEAFAQS SRRNLRNDLL VAADSITNTM SSLVKELNSE VGSETESNVD ENSBTAP00000053274/1-743 GDVQEAFAQS SRRNLRNDLL VAADSITNTM SSLVKELNSE VGSETDSNVD BACU001586/1-730 GDVQEAFAQS SRRNLRNDLL VAADSITNTM SSLVKELNSE AGSETESNVD ENSTTRP00000005418/1-743 GDVQEAFAQS SRRNLRNDLL VAADSITNTM SSLVKELNSE AGSETESNVD 651 700 bmy_16460T0/1-373 SEFARTQFED LVPSPTSEKA FLAQIHARKP GYLHSGATPS AMRGDVVTED ENSP00000470152/1-724 SEFARTQFED LVPSPTSEKA FLAQIHARKP GYIHSGATTS TMRGDMVTED ENSBTAP00000053274/1-743 SEFARTQFED LVPSPTSEKA FLAQIHARKP GYLHSGATPS TMRGDMVTED BACU001586/1-730 SEFARTQFED LVPSPTSEKA FLAQIHARKP GYLHSGATPS AMRGDVVTED ENSTTRP00000005418/1-743 SELARTQFED LVPSPTSEKA FLAQIHARKP GYLHSGATPS AMRGDMVTED 701 750 bmy_16460T0/1-373 GDPYVRPEDE NYEDDSVRQL ENELKMEEYL KQKLQDEAYQ ASYSQTDESN ENSP00000470152/1-724 ADPYVQPEDE NYENDSVRQL ENELQMEEYL KQKLQDEAYQ LHVSTETRLE ENSBTAP00000053274/1-743 GDPYVRPEDE NYEDDSVRQL ENELKMEEYL KQKLQDEAYQ ---------- BACU001586/1-730 GDPYVRPEDE NYEDDSVRQL ENELKMEEYL KQKLQDEAYQ GPKADFSSSE ENSTTRP00000005418/1-743 GDPYVRPEDE NYEDDSVRQL ENELKMEEYL KQKLQDEAYQ ---------- 751 800 bmy_16460T0/1-373 MRTGDEGQSC THPYRGEDGS LTSQKRGPTA RSSSRQTPAP KDAFCRL ENSP00000470152/1-724 ---------- -HPCPVSETK WRVLFWGFVF FGGFLSLALQ IYFWGLF ENSBTAP00000053274/1-743 ---------- ---------- ---------- --------VS LQG---- BACU001586/1-730 ----SIGIHQ AEPYVTKGPK VKQQRHGRPI LCSRRALGLS EDK---- ENSTTRP00000005418/1-743 ---------- ---------- ---------- --------VS LQG----