KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:03:09 2014 Check: 00 .. Name: ENSTTRP00000014578/1-781 Len: 845 Check: 1326 Weight: 1.00 Name: ENSP00000295951/1-811 Len: 845 Check: 1397 Weight: 1.00 Name: bmy_14171T0/1-696 Len: 845 Check: 7785 Weight: 1.00 Name: BACU015068/1-845 Len: 845 Check: 3403 Weight: 1.00 Name: ENSBTAP00000053250/1-780 Len: 845 Check: 8891 Weight: 1.00 // 1 50 ENSTTRP00000014578/1-781 MPSALAIFTC RPNSHPFQER HVYLDEPIKI GRSVARCRPA QNNATFDCKV ENSP00000295951/1-811 MPSALAIFTC RPNSHPFQER HVYLDEPIKI GRSVARCRPA QNNATFDCKV bmy_14171T0/1-696 -----MKYSH SLKKTSQRER HVYLDEPIKI GRSVARCRPA QNNATFDCKV BACU015068/1-845 MPSALAIFTC RPNSHPFQER HVYLDEPIKI GRSVARCRPA QNNATFDCKV ENSBTAP00000053250/1-780 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014578/1-781 LSRNHALVWF DHKTGKFYLQ DTKSSNGTFI NSQRLSRGSE ESPPCEILSG ENSP00000295951/1-811 LSRNHALVWF DHKTGKFYLQ DTKSSNGTFI NSQRLSRGSE ESPPCEILSG bmy_14171T0/1-696 LSRNHALVWF DHKTG----- ---------- ---------- ---------- BACU015068/1-845 LSRNHALVWF DHKTGKFYLQ DTKSSNGTFI NSQRLSRGSE ESPPCEILSG ENSBTAP00000053250/1-780 ---------- -----QFYLQ DTKSSNGTFI NSQRLSRGSE ESPPCEILSG 101 150 ENSTTRP00000014578/1-781 DIIQFGVDVT ENTRKVTHGC IVSTIKLFLP DGMEARLRSD VIHAPLPSPV ENSP00000295951/1-811 DIIQFGVDVT ENTRKVTHGC IVSTIKLFLP DGMEARLRSD VIHAPLPSPV bmy_14171T0/1-696 ---------- ---------- ---------- ---------- ---------- BACU015068/1-845 DIIQFGVDVT ENTRKVTHGC IVSTIKLFLP DGMEARLRSD VIHAPLPSPV ENSBTAP00000053250/1-780 DIIQFGVDVT ENTRKVTHGC IVSTIKLFLP DGMEARLRSD VIHAPLPSPV 151 200 ENSTTRP00000014578/1-781 DKVAANTPSM YSQELFQLSQ YLQEALHREQ MLEQKLATLQ RLLAITQEAS ENSP00000295951/1-811 DKVAANTPSM YSQELFQLSQ YLQEALHREQ MLEQKLATLQ RLLAITQEAS bmy_14171T0/1-696 -KVAANTPSM YSQELFQLSQ YLQEALHREQ MLEQKLATLQ RLLAITQEAS BACU015068/1-845 DKVAANTPSM YSQELFQLSQ YLQEALHREQ MLEQKLATLQ RLLAITQEAS ENSBTAP00000053250/1-780 DKVAANTPSM YSQELFQLSQ YLQEALHREQ MLEQKLATLQ RLLAITQEAS 201 250 ENSTTRP00000014578/1-781 DTSWQALIDE DRLLSRLEVM GNQLQACSKX XXXXXXXXXX XXXXXXXXXX ENSP00000295951/1-811 DTSWQALIDE DRLLSRLEVM GNQLQACSKN QTEDSLRKEL IALQEDKHNY bmy_14171T0/1-696 DTSWQALIDE DRLLSRLEVM GNQLQACSKN QTEDSLRKEL IALQEDKHNY BACU015068/1-845 DTSWQALIDE DRLLSRLEVM GNQLQACSKN QTEDSLRKEL IALQEDKHNY ENSBTAP00000053250/1-780 DTSWQALIDE DRLLSRLEVM GNQLQACSKN QTEDSLRKEL IALQEDKHNY 251 300 ENSTTRP00000014578/1-781 XXXXXXXXXX XXXXXXXXXX XXXXXXRSLS NTEDECTHLK EMNERTQEEL ENSP00000295951/1-811 ETTAKESLRR VLQEKIEVVR KLSEVERSLS NTEDECTHLK EMNERTQEEL bmy_14171T0/1-696 ETTAKESLRR VLQEKIEVVR KLSEVERSLS NTEDECTHLK EMNERTQEEL BACU015068/1-845 ETTAKESLRR VLQEKIEVVR KLSEVERSLS NTEDECTHLK EMNERTQEEL ENSBTAP00000053250/1-780 ETTAKESLRR VLQEKIDVVR KLSEVERSLS NTEDECTHLK EMNERTQEEL 301 350 ENSTTRP00000014578/1-781 RELANKYNGA VNEIKDLSDK LKVAEGKQEE IQQKGQAEKK ELQHKIDEME ENSP00000295951/1-811 RELANKYNGA VNEIKDLSDK LKVAEGKQEE IQQKGQAEKK ELQHKIDEME bmy_14171T0/1-696 RELANKYNGA VNEIKDLSDK LKVAEGKQEE IQQKGQAEKK ELQHKIDEME BACU015068/1-845 RELANKYNGA VNEIKDLSDK LKVAEGKQEE IQQKGQAEKK ELQHKIDEME ENSBTAP00000053250/1-780 RELANKYNGA VNEIKDLSDK LKIAEGKQEE IQQKGQAEKK ELQHKIDEME 351 400 ENSTTRP00000014578/1-781 EKEQELQAKI EALQADNDFT NERLTALQ-- ---------- ---------- ENSP00000295951/1-811 EKEQELQAKI EALQADNDFT NERLTALQ-- ---------- ---------- bmy_14171T0/1-696 EKEQELQAKI EALQADNDFT NERLTALQVR L--------- ---------- BACU015068/1-845 EKEQELQAKI EALQADNDFT NERLTALQVR LEHLQEKTLK ECSSLGIQVD ENSBTAP00000053250/1-780 EKEQELQAKI EALQADNDFT NERLTALQVR LEHLQEKTLK ECSSLGIQVD 401 450 ENSTTRP00000014578/1-781 ---------- --EHLLSKSG GDCTFIHQFI ECQKKLIVEG HLTKVVEETK ENSP00000295951/1-811 ---------- --EHLLSKSG GDCTFIHQFI ECQKKLIVEG HLTKAVEETK bmy_14171T0/1-696 ---------- --EHLQEKTL KECS------ ---------- ---------- BACU015068/1-845 DFLPKINGST EKEHLLSKSG GDCTFIHQFI ECQKKLIVEG HLTKVVEETK ENSBTAP00000053250/1-780 DFLPKINGST EKEHLLSKSG GDCTFIHQFI ECQKKLIVEG HLTKVVEETK 451 500 ENSTTRP00000014578/1-781 LSKENQARAK ESDLSDTLSP SKEKSSDDTT DAQMDEQDLN EPFAKVSLLK ENSP00000295951/1-811 LSKENQTRAK ESDFSDTLSP SKEKSSDDTT DAQMDEQDLN EPLAKVSLLK bmy_14171T0/1-696 -SLENQARAK ESDLSDTLSP SKEKSSDDTT DAQMDEQDLN EPFAKVSLLK BACU015068/1-845 LSKENQARAK ESDLSDTLSP SKEKSSDDTT DAQMDEQDLN EPFAKVSLLK ENSBTAP00000053250/1-780 LSKENQARAK ESDLSDTLSP SKEKSSDDTT DAQMDDQDLN EPLAKVSLLK 501 550 ENSTTRP00000014578/1-781 DDLQGAQSEI EAKQEIQHLR KELIEAQELA RASKQKCFEL QALLEEERKA ENSP00000295951/1-811 DDLQGAQSEI EAKQEIQHLR KELIEAQELA RTSKQKCFEL QALLEEERKA bmy_14171T0/1-696 DDLQGAQSET EAKQEIQHLR KELIEAQELA RASKQKCFEL QALLEEERKA BACU015068/1-845 DDLQGAQSET EAKQEIQHLR KELIEAQELA RASKQKCFEL QALLEEERKA ENSBTAP00000053250/1-780 DDLQGAQSEI EAKQEIQHLR KELIEAQELA RASKQKCFEL QALLEEERKA 551 600 ENSTTRP00000014578/1-781 YRNQVEESSK QIQVLQAQLQ RLHINIENLR EEKDSEITGT RDELLSARDE ENSP00000295951/1-811 YRNQVEESTK QIQVLQAQLQ RLHIDTENLR EEKDSEITST RDELLSARDE bmy_14171T0/1-696 YRNQVEESSK QIQVLQAQLQ RLHINIENLR EEKDSEITST RDELLSARDE BACU015068/1-845 YRNQVEESSK QIQVLQAQLQ RLHINIENLR EEKDSEITST RDELLSARDE ENSBTAP00000053250/1-780 YRNQVEESSK QIQVLQAQLQ RLHINIENLR EEKDSEIAST RDELLSARDE 601 650 ENSTTRP00000014578/1-781 ILLLHQAAEK AASERDTDIA SLQEELKKVR AELERWRKAA SEYEKEIMSL ENSP00000295951/1-811 ILLLHQAAAK VASERDTDIA SLQEELKKVR AELERWRKAA SEYEKEITSL bmy_14171T0/1-696 ILLLHQAAEK AASERDTDIA SLQEELKKVR AELERWRKAA SEYEKEIMSL BACU015068/1-845 ILLLHQAAEK AASERDTDIA SLQEELKKVR AELERWRKAA SEYEKEIMSL ENSBTAP00000053250/1-780 ILLLHQAAEK AASERDTDIA SLQEELKKVR AELERWRKAA SEYEKEIMSL 651 700 ENSTTRP00000014578/1-781 QNTFQLRCQQ CEDQQREEAT RLQGELEKLR KEWNVLEAEC RSLKKENVLL ENSP00000295951/1-811 QNSFQLRCQQ CEDQQREEAT RLQGELEKLR KEWNALETEC HSLKRENVLL bmy_14171T0/1-696 QNTFQLRCQQ CEDQQREEAT RLQGELEKLR KEWNVLEAEC RSLKKENVLL BACU015068/1-845 QNTFQLRCQQ CEDQQREEAT RLQGELEKLR KEWNVLEAEC RSLKKENVLL ENSBTAP00000053250/1-780 QNSFQLRCQQ CEDQQREEAT RLQGELEKLR KEWNVLDTEC RSLKKENVLL 701 750 ENSTTRP00000014578/1-781 SSELQRQEKE LHNSQKQSLE LTSDLSILQM TRKELENQVG SLKEQHLRDS ENSP00000295951/1-811 SSELQRQEKE LHNSQKQSLE LTSDLSILQM SRKELENQVG SLKEQHLRDS bmy_14171T0/1-696 SSELQRQEKE LHNSQKQSLE LSSDLSILQM TRKELENQVG SLKEQHLRDS BACU015068/1-845 SSELQRQEKE LHNSQKQSLE LTSDLSILQM TRKELENQVG SLKEQHLRDS ENSBTAP00000053250/1-780 SSELQRQEKE LHNSQKQSLE LTSDLSILQV TRKELENQVG SLKEQHLRDS 751 800 ENSTTRP00000014578/1-781 ADLKTLLSKA ENQAKDVQKE YEKTQTVLSE LKLKFEMTEQ EKQSITDELK ENSP00000295951/1-811 ADLKTLLSKA ENQAKDVQKE YEKTQTVLSE LKLKFEMTEQ EKQSITDELK bmy_14171T0/1-696 ADLKTLLSKA ENQAKDVQKE YEKTQTVLSE LKLKFEMTEQ EKQSITDELK BACU015068/1-845 ADLKTLLSKA ENQAKDVQKE YEKTQTVLSE LKLKFEMTEQ EKQSITDELK ENSBTAP00000053250/1-780 ADLKTLLSKA ENQAKDVQKE YEKTQTVLSE LKLKFEMTEQ EKQSITDELK 801 850 ENSTTRP00000014578/1-781 QCKDNLKLLR EKGNN----- ---------- ---------- ----- ENSP00000295951/1-811 QCKNNLKLLR EKGNNKPWPW MPMLAALVAV TAIVLYVPGL ARASP bmy_14171T0/1-696 QCKDNLKLLR EKGNNKPWPW MPMLAALVAV TAIVLYVPGL ARASP BACU015068/1-845 QCKDNLKLLR EKGNNKPWPW MPMLAALVAV TAIVLYVPGL ARASP ENSBTAP00000053250/1-780 QCKDNLKLLR EKGNNKPWPW MPMLAALVAV TAIVLYVPGL ARASP