KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:59 2014 Check: 00 .. Name: ENSP00000287777/1-621 Len: 656 Check: 3735 Weight: 1.00 Name: ENSBTAP00000052922/1-624 Len: 656 Check: 8739 Weight: 1.00 Name: bmy_03305T0/1-654 Len: 656 Check: 590 Weight: 1.00 Name: ENSTTRP00000009224/1-622 Len: 656 Check: 9141 Weight: 1.00 // 1 50 ENSP00000287777/1-621 MALGLEQAEE QRLYQQTLLQ DGLKDMLDHG KFLDCVVRAG EREFPCHRLV ENSBTAP00000052922/1-624 MALGLEQAEE QRLYQQTLLQ DGLKDMLDHG KFLDCVVRVG EREFPCHRLV bmy_03305T0/1-654 MALGLEQAEE QRLYQQTLLQ DGLKDMLDHG KFLDCVVRVG EREFPCHRLV ENSTTRP00000009224/1-622 MASGLEQAEE QRLYQQTLLQ DGLKDMLDHG KFLDCVVRVG EREFPCHRLV 51 100 ENSP00000287777/1-621 LAACSPYFRA RFLAEPERAG ELHLEEVSPD VVAQVLHYLY TSEIALDEAS ENSBTAP00000052922/1-624 LAACSPYFRA RFLAEPESAG ELRLEEVSPD VVAQVLHYLY TSEIALDEAS bmy_03305T0/1-654 LAACSSYFRA RFLAEPERAG ELRLEEVSPD VVAQVLHYLY TSEIALDEAS ENSTTRP00000009224/1-622 LAACSPYFRA RFLAEPERAG ELRLEEVSPD VVAQVLHYLY TSEIALDEAS 101 150 ENSP00000287777/1-621 VQDLFAAAHR FQIPSIFTIC VSFLQKRLCL SNCLAVFRLG LLLDCARLAV ENSBTAP00000052922/1-624 VQDLFAAAHR FQIPSIFTIC VSFLQKRLCL ANCLAVFRLG LLLDCARLAV bmy_03305T0/1-654 VQDLFAAAHR FQIPSIFTIC VSFLQKRLCL ANCLAVFRLG LLLDCARLAV ENSTTRP00000009224/1-622 VQDLFATAHR FQIPSIFTIC VSFLQKRLCL ANCLAVFRLG LLLDCARLAV 151 200 ENSP00000287777/1-621 AARDFICAHF TLVARDADFL GLSADELIAI ISSDGLNVEK EEAVFEAVMR ENSBTAP00000052922/1-624 SARDFICARF SLVARDADFL GLSADELIAI ISSDGLNVEK EEAVFEAVMR bmy_03305T0/1-654 AARDFICARF SLVSRDADFL GLSADELIAI ISSDGLNVEK EEAVFEAVMR ENSTTRP00000009224/1-622 AARDFICARF SLVARDADFL GLSADELIAI ISSDGLNVEK EEAVFEAVMR 201 250 ENSP00000287777/1-621 WAGSGDAEAQ AERQRALPTV FESVRCRLLP RAFLESRVER HPLVRAQPEL ENSBTAP00000052922/1-624 WASSGDAEAQ AERQRALPTV FESVRFRLLP RAFLESRVER HPLVRAQPEL bmy_03305T0/1-654 WASSGDAEGQ AERQRSLPTV FESVRCRLLP RAFLESRVER HPLVRAQPEL ENSTTRP00000009224/1-622 WASSGDAEGK AERQRSLPTV FESVRCRLLP RAFLESRVER HPLVRAQPEL 251 300 ENSP00000287777/1-621 LRKVQMVKDA HEGRITTLR- -KKKKGKDGA GAKEADKGTS KAKAEED-EE ENSBTAP00000052922/1-624 LRKVQMVKDA HEGRITVLRK KKKEKGKESA GAKATDKGTT EAKAEEEEEE bmy_03305T0/1-654 LRKVQMVKDA HEGRITMLR- -KKKTGXEAA GAKATDKGTA EAKAEEDEEE ENSTTRP00000009224/1-622 LRKVQMVKDA HEGRITVLR- KKKQKGKEAA GAKATDKGTA EAKAEEDEEE 301 350 ENSP00000287777/1-621 AERILPGILN DTLRFGMFLQ DLIFMISEEG AVAYDPAANE CYCASLSNQV ENSBTAP00000052922/1-624 AERILPGILN DTLRFGMFLQ DLIFMISEEG AVAYDPAANE CYCASLSTQI bmy_03305T0/1-654 AERILPGILN DTLRFGMFLQ DLIFMISEEG AMAYDPAANE CYCASLSTQI ENSTTRP00000009224/1-622 AERVLPGILN DTLRFGMFLQ DLIFMISEEG AVAYDPAANE CYCASLSTQI 351 400 ENSP00000287777/1-621 PKNHVSLVTK ENQVFVAGGL FYNEDNKEDP MSAYFLQFDH LDSEWLGMPP ENSBTAP00000052922/1-624 PKNHVSLVTK ENQIFVAGGL FYNEDNKEDP MSAYFLQFDH LDSEWLGMPP bmy_03305T0/1-654 PKNHVSLVTK ENQVFVAGGL FYNEDNKEDP MSAYFLQFDH LDSEWLGMPP ENSTTRP00000009224/1-622 PKNHVSLVTK ENQVFVAGGL FYNEDNKEDP MSAYFLQFDH LDSEWLGMPP 401 450 ENSP00000287777/1-621 LPSPRCLFGL GEALNSIYVV GGREIKDGER CLDSVMCYDR LSFKWGESDP ENSBTAP00000052922/1-624 LPSPRCLFGL GEALNSIYVV GGRELKDDEQ SLDSVMCYDR LSFKWGESDP bmy_03305T0/1-654 LPSPRCLFGL GEALNSIYVV GGRELKDDER SLDSVMCYDR LSFKWGESDP ENSTTRP00000009224/1-622 LPSPRCLFGL GEALNSIYVV GGRELKDDER S-DSVMCYDR LSFKWGESDP 451 500 ENSP00000287777/1-621 LPYVVYGHTV LSHMDLVYVI GGKGSDRKCL NKMCVYDPKK FEWKELAPMQ ENSBTAP00000052922/1-624 LPYAVYGHSV LSHMDLVYVI GGKGSNRKCL NKMSVYDPKK FEWRELAPMK bmy_03305T0/1-654 LPYAVYGHSV LSHMDLVYVI GGKGSDRKCL NKMCVYDPKK FEWRELAPMK ENSTTRP00000009224/1-622 LPYAVYGHSV LSHMDLVYVI GGKGSDRKCL NKMCVYDPKK FEWRELAPMK 501 550 ENSP00000287777/1-621 TARSLFGATV HDGRIIVAAG VTDTGLTSSA EVYSITDNK- ---------- ENSBTAP00000052922/1-624 TPRSLFGATI HDGRIFVAAG VTDTGLTSSA EVYSIADNK- ---------- bmy_03305T0/1-654 TARSLFGATI HDGRIFVAAG VTDTGLTGSA EVYNIVDSKY GCFPPPCPRS ENSTTRP00000009224/1-622 TARSLFGATI HDGRIFVAAG VTDTGLTSSA EVYNIVDGK- ---------- 551 600 ENSP00000287777/1-621 ---------- ---------- -WAPFEAFPQ ERSSLSLVSL VGTLYAIGGF ENSBTAP00000052922/1-624 ---------- ---------- -WAPFEAFPQ ERSSLSLVSL AGTLYAIGGF bmy_03305T0/1-654 TGQPGTKGPT VPARLCGFGP MWAPFEAFPQ ERSSLSLVSL AGTLYAIGGF ENSTTRP00000009224/1-622 ---------- ---------- -WAPFEAFPQ ERSSLSLVSL AGTLYAIGGF 601 650 ENSP00000287777/1-621 ATLETESGEL VPTELNDIWR YNEEEKKWEG VLREIAYAAG ATFLPVRLNV ENSBTAP00000052922/1-624 ATLETESGEL VPTELNDIWR YNEDEKKWEG VLREIAYAAG ATFLPVRLNV bmy_03305T0/1-654 ATLETESGEL VPTELNDIWR YNEDEKKWEG VLREVTYAAG ATFLPVRLNV ENSTTRP00000009224/1-622 ATLETESGEL VPTELNDIWR YNEDEKKWEG VLREIAYAAG ATFLPVRLNV 651 700 ENSP00000287777/1-621 LCLTKM ENSBTAP00000052922/1-624 LRLTKL bmy_03305T0/1-654 LRLTKL ENSTTRP00000009224/1-622 LRLTKL