KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:01:33 2014 Check: 00 .. Name: BACU010906/1-597 Len: 657 Check: 5234 Weight: 1.00 Name: ENSTTRP00000002510/1-560 Len: 657 Check: 4804 Weight: 1.00 Name: ENSP00000417291/1-624 Len: 657 Check: 9626 Weight: 1.00 Name: bmy_22570T0/1-587 Len: 657 Check: 1988 Weight: 1.00 Name: ENSBTAP00000052175/1-559 Len: 657 Check: 3390 Weight: 1.00 // 1 50 BACU010906/1-597 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002510/1-560 ---------- ---------- ---------- ---------- ---------- ENSP00000417291/1-624 MGIGVSLLLQ FSLTPGGYRS VGRSRRCSRG SIPRNIPKRS WKKPHPQLCS bmy_22570T0/1-587 ---------- ---------- ---------- --MWGSPWRG WGR------- ENSBTAP00000052175/1-559 ---------- ---------- ---------- ---------- ---------- 51 100 BACU010906/1-597 -------MLE RRCRGPMAMG PAQPRLLSGP SQESPQTLEK EPQGLRSQGT ENSTTRP00000002510/1-560 -------MLE RRCRGPVAMG PAQPRLLSGP SQESPQTLEK EPQGLRSQGT ENSP00000417291/1-624 LQAEEEPMLE RRCRGPLAMG LAQPRLLSGP SQESPQTLGK ESRGLRQQGT bmy_22570T0/1-587 -TAEEEPMLE RRCRGPVAMG PAQPRLLSGP SQESPQTLEK EPQGLRSQGT ENSBTAP00000052175/1-559 -------MLE RRCRGPVAMG PAQPRLLSGP SQESPQTLEK EPQGLRSRGT 101 150 BACU010906/1-597 AVAQSGSQAL GRAHRCAHCR RHFPGWVALW LHARHCQARL PLPCPECGRR ENSTTRP00000002510/1-560 AVAQPGSQAL GRAHRCAHCR RHFPGWVALW LHARRCQARL PMPCPECGRR ENSP00000417291/1-624 SVAQSGAQAP GRAHRCAHCR RHFPGWVALW LHTRRCQARL PLPCPECGRR bmy_22570T0/1-587 DVAQSGSQAL GRAHRCAHCR RHFPGWVALW LHARRCQARL PLPCPECGRR ENSBTAP00000052175/1-559 AAAQSGGQAL GRAHRCAHCR RHFPGWVALW LHARRCQARL PRPCPECGRR 151 200 BACU010906/1-597 FRHAPFLALH CQVHAAATPD LGFACHLCGQ SFRGWVALAL HLLAHSAAKR ENSTTRP00000002510/1-560 FRHAPFLALH CQVHAAATPD LGF-----GQ SFRGWVALVL HMLAHSAAKR ENSP00000417291/1-624 FRHAPFLALH RQVHAAATPD LGFACHLCGQ SFRGWVALVL HLRAHSAAKR bmy_22570T0/1-587 FRHAPFLALH CQVHAAATPD LGFACHLCGQ SFRGWVALAL HLLAHSAAKR ENSBTAP00000052175/1-559 FRHAPFLALH CQVHAAATPD QGFACHLCGQ SFRGWVALVL HLRAHSAAKR 201 250 BACU010906/1-597 PIACPDCERR FWRRKQLRAH LRRCHPPAPE ARPFICGNCG RSFAQWDQLV ENSTTRP00000002510/1-560 PIACPDCERR FWRRKQLRAH LRRCHPPAPE ARPFICGNCG RSFAQWDQLV ENSP00000417291/1-624 PIACPKCERR FWRRKQLRAH LRRCHPPAPE ARPFICGNCG RSFAQWDQLV bmy_22570T0/1-587 PIACPDCERR FWRRKQLRAH LRRCHPPAPE ARPFICGNCG RSFAQWDQLV ENSBTAP00000052175/1-559 PIACPACERR FWRRKQLRAH SRRCHPPAPE ARPFICGNCG RSFAQWDQLV 251 300 BACU010906/1-597 AHKRVHVAEA LEEAEAKALG PRPRGCPAVT APRPGGDAVD RPFXXXXXXX ENSTTRP00000002510/1-560 AHKRVQVAEA LEEAAAKDLG PRPRGRPAMT APRPGGDAVD RPLQCT---- ENSP00000417291/1-624 AHKRVHVAEA LEEAAAKALG PRPRGRPAVT APRPGGDAVD RPFQCA---- bmy_22570T0/1-587 AHKRVHVAEA LEEAAAKALG PRPRGRPAVT APRPGGDAVD RPFQCT---- ENSBTAP00000052175/1-559 THKRVHVAEA LEEAAAKALG PRPRGRPAVT APRPGGDAVD RPFQCA---- 301 350 BACU010906/1-597 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000002510/1-560 ---------- ---------- ---WCGKRFR HKPNLIAHRS VHTGERPHQC ENSP00000417291/1-624 ---------- ---------- ---CCGKRFR HKPNLIAHRR VHTGERPHQC bmy_22570T0/1-587 ---------- ---------- ---CCGKRFR HKPNLIAHRR VHTGERPHQC ENSBTAP00000052175/1-559 ---------- ---------- ---CCGKRFR HKPNLIAHRR VHTGERPHQC 351 400 BACU010906/1-597 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000002510/1-560 PECGKRFTNK PKRTSHRRIH TGE-PYPYLE CGSRFRHKPN LLSHSKIHKR ENSP00000417291/1-624 PECGKRFTNK PYLTSHRRIH TGEKPYPCKE CGRRFRHKPN LLSHSKIHKR bmy_22570T0/1-587 PECGKRFTNK PYLTSHRRIH TGEKPYPCTE CGRRFRHKPN LLSHSKIHKR ENSBTAP00000052175/1-559 PECGKRFTNK PYLTSHRRIH TGEKPYPCTE CGRRFRHKPN LLSHSKIHKR 401 450 BACU010906/1-597 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXPA PEPLEAPGEP ENSTTRP00000002510/1-560 SEGSAQGATR SGSPQLPAGP XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000417291/1-624 SEGSAQAAPG PGSPQLPAGP QESAAEP--- -TPAVPLKPA QEP--PPGAP bmy_22570T0/1-587 SEGSAQGAPR SGSPQLPAGP PEPSSEPSSE PAPEPPLKPA PEPLEAPGEP ENSBTAP00000052175/1-559 SEGSAQG--- --------GP QPPASAP--E RTPEPPPEPA PEPAEVPVGP 451 500 BACU010906/1-597 ---PGHQAEA PPSLYSCEDC GRSFRLERFL RAHQRQHTGE RPFTCAECGK ENSTTRP00000002510/1-560 ------XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK GPFTCSEGGK ENSP00000417291/1-624 PEHPQDPIEA PPSLYSCDDC GRSFRLERFL RAHQRQHTGE RPFTCAECGK bmy_22570T0/1-587 ---PGHQAEA PPSLYSCEDC GRSFRLERFL RAHQRQHTGE RPFTCAECGK ENSBTAP00000052175/1-559 -GQPSAAAEA PPSLHTCADC GRGFRLERFL RAHQRQHGGE RPFACAECGK 501 550 BACU010906/1-597 NFGKKTHLVA HSRVHSGERP FACEECGRRF SQGSHLAAHR RDHAPERPFV ENSTTRP00000002510/1-560 NFGKKTQQVA HSRVQSGERP -ACEECGRRF SQGSPLASHR RDHAPELPFV ENSP00000417291/1-624 NFGKKTHLVA HSRVHSGERP FACEECGRRF SQGSHLAAHR RDHAPDRPFV bmy_22570T0/1-587 NFGKKTHLVA HSRVHSGERP FACEECGRRF SQGSHLAAHR RDHAPERPFV ENSBTAP00000052175/1-559 HFGKKTHLVA HSRVHSGERP FACEECGRRF SQGSHLAAHR RDHAPERPFV 551 600 BACU010906/1-597 CPDCGKAFRH KPYLAAHRRI HTGEKPYVCP DCGKAFSQKS NLVSHRRIHT ENSTTRP00000002510/1-560 CPDCGKAFRH KPYLAAHRRI HTGEKPYVCP DCGKAFSQKS NLVSHRRIHT ENSP00000417291/1-624 CPDCGKAFRH KPYLAAHRRI HTGEKPYVCP DCGKAFSQKS NLVSHRRIHT bmy_22570T0/1-587 CPDCGKAFRH KPYLAAHRRI HTGEKPYVCP DCGKAFSQKS NLVSHRRIHT ENSBTAP00000052175/1-559 CPDCGKAFRH KPYLAAHRRI HTGEKPYVCP ECGKAFSQKS NLVSHRRIHT 601 650 BACU010906/1-597 GERPYACPDC DRSFSQKSNL ITHRKSHIRD GAFCCAICGQ TFDDEEKLLA ENSTTRP00000002510/1-560 GERPYACPDC DRSFSQKSNL ITHRKSHIRD GAFCCAICGQ TFDDEEKLLA ENSP00000417291/1-624 GERPYACPDC DRSFSQKSNL ITHRKSHIRD GAFCCAICGQ TFDDEERLLA bmy_22570T0/1-587 GERPYACPDC DRSFSQKSNL ITHRKSHIRD GAFCCAICGQ TFDDEEKLLA ENSBTAP00000052175/1-559 GERPYACPDC DRSFSQKSNL ITHRKSHIRD GAFCCAICGQ TFDDEGKLLA 651 700 BACU010906/1-597 HQKKHDV ENSTTRP00000002510/1-560 HQKKHDV ENSP00000417291/1-624 HQKKHDV bmy_22570T0/1-587 HQKKHDV ENSBTAP00000052175/1-559 HQKKHDV