KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:01:26 2014 Check: 00 .. Name: bmy_00547T0/1-728 Len: 1713 Check: 836 Weight: 1.00 Name: ENSP00000364632/1-614 Len: 1713 Check: 8319 Weight: 1.00 Name: BACU015566/1-1525 Len: 1713 Check: 252 Weight: 1.00 Name: ENSBTAP00000052087/1-618 Len: 1713 Check: 3997 Weight: 1.00 // 1 50 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 MGGPQGNQGL LGCTQFRPRD TGGAGLRILC LVLCGPLTPA RGDPGALLQL ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 GMDVLNREVQ NAMDESHILE KMAAEAGKKL PGMKPIKGIT DLKVKDVQIP ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 VITLSFLPGV GIFQCVSMGM TITGKSFMGG NMDIIVVLNI TATNRFLQDE ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 EMGLPMFKSE GCEVLLVSVT TNPMSSMLPK MVNKFLDSTL HKVLPGLMCP ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 201 250 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 AIDAVLVYVN KKWANLNGGS CPLPVGQMGT VRYVLASIPT TTASHIQVDF ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 251 300 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 SPVVQQQKGN TIQLADAGEA EFPEDYAEGS SQLLLSATLL TAELALLQKS ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 FDVNVQEMTI GKLPPQTTET LAGFIPEVAK AYPKPKPLVT QIRINKPPKV ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 TTKTGKSLLH RHGTLETFAP LLRGKAPVSL FLLEIHFNLK IQYSVREDRL ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 QMATSLDRLL SLSRGSSLIG AFNEKALTGF ITDFLQEAYI PAINAIQNSL ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 VGGPILQNML GTVTSVNQGL LGSGGLLGGG GLLSYGGVLG IVKELSGLKT ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 EEITLPKVSL KLLPGFGVQL SLHTKVGLHG SGPLGGLLQL AAEVKVSSRV ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 ALGVSARRTP ILILKRCSTH LGHISLLSGL LPALLFGVVE QTIFKVLPEF ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 601 650 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 LSVRAAGQPC PVVDSVLGVV NELLGAVLCL VPLGALGSVE FTLATLPLIS ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 651 700 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 NRYIELDVNP IVKSVAGDII AFPKPPNPIK VPLKEDHTSQ VTVPLYLFNT ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 701 750 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 VFGLLQTIGA LDLDITLELV SSSVPLTTTE LAALVPETLR KLPPGQQLLL ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 751 800 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 SLRVKEAPMV TLQDKKATVS VPANIHVLSY LPKGTREAFF QLNRVMTLNA ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 801 850 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------- ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 QLAPSATKLH LSLSLEWLSV KLASSFAHAF VASSWEGEQL GIGEGLQASR ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 851 900 bmy_00547T0/1-728 ---------- ---------- ---------- ---------- ---------M ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------M BACU015566/1-1525 LEEWLSDVVW VAYMPKLNVN LDVGIPLPKA LNVSFASAAL VIIARSRASM ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------M 901 950 bmy_00547T0/1-728 WTAWCVATLS VVAVCGIRQE TNAVLRVTKD VLSNAISGTL QQSDALRSAL ENSP00000364632/1-614 WMAWCVAALS VVAVCGTSHE TNTVLRVTKD VLSNAISGML QQSDALHSAL BACU015566/1-1525 WTAWCVASLS VVAVCGIRQE TNAVLRVTKD VLSNAISGTL QQSDALRSAL ENSBTAP00000052087/1-618 WTAWCVAALS VAAVCGVRQD TNTVLRVTKH VLSNAISGTL QQSDAFRSAL 951 1000 bmy_00547T0/1-728 REVPVGKAGG DGGGPLLGAL LGGGGGGRGG GLLGGLLGGG GGDLLGGVGG ENSP00000364632/1-614 REVPL----- ---------- ---------- ---------- ---------- BACU015566/1-1525 REVPV----- ---------- ---------- ---------- ---------- ENSBTAP00000052087/1-618 REVPM----- ---------- ---------- ---------- ---------- 1001 1050 bmy_00547T0/1-728 SLLGGSSSSD GGLLGGNGGG LLGGGSSSGG GLLGGGGHGG GGLLGDSGGL ENSP00000364632/1-614 ---------- ---------- ---------- ---------- ---------- BACU015566/1-1525 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000052087/1-618 ---------- ---------- ---------- ---------- ---------- 1051 1100 bmy_00547T0/1-728 LGGLLGGGRH HYDDYRGAEF PRGVGGVPYN EFHVQKPPPE YTNGNQLGSN ENSP00000364632/1-614 ---------- ---------- --GVGDIPYN DFHVRGPPPV YTNGKKLDGI BACU015566/1-1525 ---------- ---------- --GVGGVPYN EFHVQEPPPE YTNGNQLGSN ENSBTAP00000052087/1-618 ---------- ---------- --GVGGVPYN DFHVR-PPPK YTNGHQLGGN 1101 1150 bmy_00547T0/1-728 YKYGHIEAND NTAQLGGKYR YGETLESDGS IRDLRKGNYR NAENAYGSQR ENSP00000364632/1-614 YQYGHIETND NTAQLGGKYR YGEILESEGS IRDLRNSGYR SAENAYGGHR BACU015566/1-1525 YKYGHTEAND NTAQQGGKYR YGETLESDGS IRDLRKGNYR NAESAYGSQR ENSBTAP00000052087/1-618 YKYGHVEASD NTAQLGGKYR YGEILESDGS VRDLRTSNYR KAENAHGSHR 1151 1200 bmy_00547T0/1-728 GRRRYRSAEV AATMGRLHRQ ELQPGEIPPG VATGALGPGG LLGTGGILAA ENSP00000364632/1-614 GLGRYR---- AAPVGRLHRR ELQPGEIPPG VATGAVGPGG LLGTGGMLAA BACU015566/1-1525 GHRRYRSAEV AATMGRLHRQ ELQPGEIPPG VATGALGPGG LLGTGGILAA ENSBTAP00000052087/1-618 DHGRYRSAEG AAPVGRLHRR ELRPGEIPPG VATGALGPGG LLGTGGMLAA 1201 1250 bmy_00547T0/1-728 NGILAGQGGL LSGGGLLGDG GLLGGGGVLG ALGEGGILST VQGITG---- ENSP00000364632/1-614 DGILAGQGGL LGGGGLLGDG GLLGGGGVLG VLGEGGILST VQGITGLRIV BACU015566/1-1525 EGILAGQGGL LGGGGLLGDG GLLGGGGVLG TLGEGGILST VQGITGLRIV ENSBTAP00000052087/1-618 DGILAGQGGL LGGGGLLGDG GLLGGGGVLG VLGEGGIIST VQGITGLRIV 1251 1300 bmy_00547T0/1-728 ---------- ---------- ---------- -LTGFLDIAV EVNITAKVQL ENSP00000364632/1-614 ELTLPRVSVR LLPGVGVYLS LYTRVAINGK SLIGFLDIAV EVNITAKVRL BACU015566/1-1525 ELTLPRVSVR LLPGVGVYLS LYTRVAINGK SLIGFLDIAV EVNITAKVQL ENSBTAP00000052087/1-618 ELTLPRVSVR LLPGVGVYLS LYTRVAINGK SLIGFLDIAV EVNITAKVRL 1301 1350 bmy_00547T0/1-728 TMDRTGYPRL VMEQCDTLLG GIKVKLLRG- ---------- ---------- ENSP00000364632/1-614 TMDRTGYPRL VIERCDTLLG GIKVKLLRGL LPNLVDNLVN RVLADVLPDL BACU015566/1-1525 TMDRTGYPRL VVEQCDTLLG GVKVKLLRGL LPNLVDNLVN QVLANVLPDL ENSBTAP00000052087/1-618 TMDRTGYPRL VVERCDTLLG GIKVRLLRGL LPNLVDNLVN RVLANVLPDL 1351 1400 bmy_00547T0/1-728 ---------- ---------- ---------- VQYTFSSLPL VTGKFLELDL ENSP00000364632/1-614 LCPIVDVVLG LVNDQLGLVD SLIPLGILGS VQYTFSSLPL VTGEFLELDL BACU015566/1-1525 LCPIVDVVLG LVNDQLGLVD SLIPLGILGS VQYTFSSLPL VTGEFLELDL ENSBTAP00000052087/1-618 LCPIVDVVLG LVNDQLGLVD SLIPLGILGS VQYTFSSLPL VTGEFLELDL 1401 1450 bmy_00547T0/1-728 NTLVGEVGGE LIDYPLGRPA MSPRQKMPEL PPMGDNTNSQ LAISANFLGS ENSP00000364632/1-614 NTLVGEAGGG LIDYPLGWPA VSPKP-MPEL PPMGDNTKSQ LAMSANFLGS BACU015566/1-1525 NTLVGEVGGE LIDYPLGRPA MSPRQKMPEL PPMGDNTNSQ LAISANFLGS ENSBTAP00000052087/1-618 NTLVGEAGGD LIDYPLGRPA LSPRQKMPEL PPMGDNTNSQ LAISANFLGS 1451 1500 bmy_00547T0/1-728 VLTLLQKQGA LDIDITDGMF EELPSLTTST LGALIPEVFQ QYPESCSLTX ENSP00000364632/1-614 VLTLLQKQHA LDLDITNGMF EELPPLTTAT LGALIPKVFQ QYPESCPLII BACU015566/1-1525 VLTLLQKQGA LDIDITDGMF EELPPLTTST LGALIPEVFQ QYPESCSLTI ENSBTAP00000052087/1-618 VLTLLQKQGA LDIDITDGMV IQLPPLTTST LGALIPKVFQ QYPESRPLTI 1501 1550 bmy_00547T0/1-728 RIQVPNPPSV MLQKDQALVK VFATSMVMVS QPNDVETTIC LIDVQCRHRH ENSP00000364632/1-614 RIQVLNPPSV MLQKDKALVK VLATAEVMVS QPKDLETTIC LIDVD----- BACU015566/1-1525 RIQVPNPPSV MLQKDQALVK VFATSMVMVS QPNDVETTIC LIDVD----- ENSBTAP00000052087/1-618 RIQVPNPPLV TLQKDQALVK VFATSEVMVS QPNDVETTIC LIDVD----- 1551 1600 bmy_00547T0/1-728 PGGPSGAEHL SDRGRDXAAA LKEARTSPGK ARPDTVPGSK SLQPFDSPLP ENSP00000364632/1-614 ------TEFL ASFSTEGDKL MIDAKLEKTS LNLRT----S NVGNFDIGLM BACU015566/1-1525 ------TELL AMFSVENDKL MVDTKLDKTR LNLRT----S NVGNFDVGLL ENSBTAP00000052087/1-618 ------TELL AMFSVENDKL MIDAKLDKTS LNLRT----S NVGNFDVGLL 1601 1650 bmy_00547T0/1-728 SPPTLFSPAP TLRKGPAIAP VDKQSHPRSA LLPTPAGGWR SPGGLRPLGL ENSP00000364632/1-614 E--VLVEKIF DLAFMPAMNA V--------- ---------- -------LG- BACU015566/1-1525 E--VLVGKIF DLAFMPAMNA M--------- ---------- -------LG- ENSBTAP00000052087/1-618 E--VLVGKIF DLAFMPAMNA V--------- ---------- -------LG- 1651 1700 bmy_00547T0/1-728 QAAPRPQAEN FTLSIKDSTF PAVAVSLHKG PSLRVWVFLS FKSLRGAPGR ENSP00000364632/1-614 SGVPLPK--- ----ILNIDF SNADIDVLE- ---DLLV--- LSA------- BACU015566/1-1525 SGIPLPK--- ----ILNIDF SNADIDILEV RGDRVLFCFP LHT------- ENSBTAP00000052087/1-618 SGVPLPK--- ----ILNIDF SNADIDILE- ---GILF--- LNM------- 1701 1750 bmy_00547T0/1-728 CSYSLMKGGS VHD ENSP00000364632/1-614 ---------- --- BACU015566/1-1525 ---------- --- ENSBTAP00000052087/1-618 ---------- ---