KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 18:01:22 2014  Check: 00 ..

 Name: ENSP00000386385/1-212     Len:    212  Check:  6255  Weight:  1.00
 Name: ENSBTAP00000051908/1-212  Len:    212  Check:  5361  Weight:  1.00
 Name: ENSTTRP00000009584/1-209  Len:    212  Check:  6443  Weight:  1.00
 Name: bmy_00558T0/1-191         Len:    212  Check:  1007  Weight:  1.00
 Name: BACU015555/1-212          Len:    212  Check:  7292  Weight:  1.00

//


                          1                                                   50
ENSP00000386385/1-212     MAAPPQLRAL LVVVNALLRK RRYHAALAVL KGFRNGAVYG AKIRAPHALV 
ENSBTAP00000051908/1-212  MVAPPQLRAL LFAINALLSK RRYHAALAML KGFRNGAVYG AKIRAPHALV 
ENSTTRP00000009584/1-209  MAAPPQLRAL LLAINALLRK RRYHAALSML KGFRNGAVYG AKVRA-HALV 
bmy_00558T0/1-191         MAAPPQLRTL LLAINALLRK RRYHAALSML KGFRNGAV-- ---------- 
BACU015555/1-212          MAAPPQLRTL LLAINALLRK RRYHAALSML KGFRNGAVYG VKIRAPHALV 


                          51                                                 100
ENSP00000386385/1-212     MTFLFRNGSL QEKLWAILQA TYIHSWNLAR FVFTYKGLRA LQSYIQGKTY 
ENSBTAP00000051908/1-212  MTFLFRSGSL REKLRAILQA TYTHSWNLAR FVFLYKGLCA LQSHVQGKTY 
ENSTTRP00000009584/1-209  MTFLFRSGSL REKLEAILQA TYTHYWNL-Q LVFTYKELCA LQSHVQGDTY 
bmy_00558T0/1-191         ---------L REKLWAILQA TYTHSRNLAS FVFTYKGLCA LQSHLQGETY 
BACU015555/1-212          MTFLFRSGSL REKLWAILQA TYTHSRNLAS FVFTYKGLCA LQSHLQGETY 


                          101                                                150
ENSP00000386385/1-212     PAHAFLAAFL GGILVFGENN NINSQINMYL LSRVLFALSR LAVEKGYIPE 
ENSBTAP00000051908/1-212  QAHSFVSAFI GGLLVFGNNN NINSQISMYL LSRVLFALCR LGVEKGFIPE 
ENSTTRP00000009584/1-209  QVHSLGAAFL ECIMVSG-NN NINSQINMYL MSRLLFALCR LGVGKGYIPE 
bmy_00558T0/1-191         QVHSFVAAFL GGVLVFGNNN NINSQINMYL MSRLLFALCR LGVGKGYIPE 
BACU015555/1-212          QVHSFVAAFL GGVLVFGNNN NINSQINMYL MSRLLFALCR LGVGKGYIPE 


                          151                                                200
ENSP00000386385/1-212     PRWDPFPLLT AVVWGLVLWL FEYHRSTLQP SLQSSMTYLY EDSNVWHDIS 
ENSBTAP00000051908/1-212  PRLDPFPWFS GLVWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS 
ENSTTRP00000009584/1-209  PRWDPFPLFT GIMWGLMLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS 
bmy_00558T0/1-191         PRWDPFPLFS GLLWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS 
BACU015555/1-212          PRWDPFPLFT GLLWGLVLWL FEYHRPTLQP SLQSSMTYLY EDSNVWHDLS 


                          201                                                250
ENSP00000386385/1-212     DFLVYNKSRP SN 
ENSBTAP00000051908/1-212  DFFIYNKSQP SK 
ENSTTRP00000009584/1-209  DFLIYSKRRP SE 
bmy_00558T0/1-191         DFLIYSKRRP SE 
BACU015555/1-212          DFLIYSKRRP SE