KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:55 2014 Check: 00 .. Name: ENSP00000363043/1-384 Len: 393 Check: 339 Weight: 1.00 Name: ENSBTAP00000051221/1-384 Len: 393 Check: 1212 Weight: 1.00 Name: bmy_00600T0/1-393 Len: 393 Check: 6147 Weight: 1.00 Name: ENSTTRP00000010900/1-329 Len: 393 Check: 5551 Weight: 1.00 // 1 50 ENSP00000363043/1-384 MAAVQMDPEL AKRLFFEGAT VVILNMPKGT EFGIDYNSWE VGPKFRGVKM ENSBTAP00000051221/1-384 MAAMQMDPEL ARRLFFEGAT VVILNMPKGT EFGIDYNSWE VGPKFRGVKM bmy_00600T0/1-393 MAAMQMDPEL AKHLFFEGAT VVILNMPKGT EFGIDYNSWE VGPKFRGVKM ENSTTRP00000010900/1-329 MAAMQMDPEL AKHLFFEGAT VVILNMPKGT EFGIDYNSWE VGPKFRGVKM 51 100 ENSP00000363043/1-384 IPPGIHFLHY SSVDKANPKE VGPRMGFFLS LHQRGLTVLR WSTLREEVDL ENSBTAP00000051221/1-384 IPPGIHFLHY SSVDKANPRE VGPRMGFFLN LQQRGLKVLR WDAAREEVDL bmy_00600T0/1-393 IPPGIHFLHY SSVDKANPRE VGPRMGFFLS LQQRGLKVLR WDAVQEEVDL ENSTTRP00000010900/1-329 IPPGIHFLHY SSVDKANPRE VGPRMGFFLS LQQRGLKVLR WDAVQEEVDL 101 150 ENSP00000363043/1-384 SPAPESEVEA MRANLQELDQ FLGPYPYATL KKWISLTNFI SEATVEKLQP ENSBTAP00000051221/1-384 SPAPEAEVEA MRANLQELDQ FLGPYPYTTL KKWISLTNFI SEATVEKLQP bmy_00600T0/1-393 SPAPEAVVEA MRANLQELDQ FLGPYPYATL KKWISLTNFI SEATVEKLQP ENSTTRP00000010900/1-329 SPAPEAVVEA MRANLQELDQ FLGPYPYATL KKWISLTNFI SEATVEKLQP 151 200 ENSP00000363043/1-384 ENRQICAFSD VLPVLSMKHT KDRVGQNLPR CGIECKSYQE GLARLPEMKP ENSBTAP00000051221/1-384 ESRQICAFSE VLPVLSMRHT KDRVGQNLPR CGAECKSYQE GLARLPEMKP bmy_00600T0/1-393 ESRHICAFSE VLPVLSMKYT KDRVGQNLPL CGTECKSYQE GLARLPEMKP ENSTTRP00000010900/1-329 ESRQICAFSD VLPVLSMKYT KDRVEQNLPR CGTECKSYQE GLARLPEMKP 201 250 ENSP00000363043/1-384 RAGTEIRFSE LPTQMFPEGA TPAEITKHSM DLSYALETVL NKQFPSSPQD ENSBTAP00000051221/1-384 RAGTEIRFSE LPTQMFPAGA TPAEITRHSM DLSYALETVL SKQFPCSPQD bmy_00600T0/1-393 RAGTEIRFSE LPTQMFPAGA TPAEITRHSM DLSYALETVL SKQFPQSPQD ENSTTRP00000010900/1-329 RPGTEIRFSE LPTQMFPAGA TPAEITRHSM DLSYALETVL SKQFPQSPQD 251 300 ENSP00000363043/1-384 VLGELQFAFV CFLLGNVYEA FEHWKRLLNL LCRSEAAMMK HHTLYINLIS ENSBTAP00000051221/1-384 VLGELQFAFV CFLLGNVYEA FEHWKRLLNL LCRSEEAMVK HHSLYVNLIS bmy_00600T0/1-393 VLGELQFAFV CFLLGNVYEA FEHWKQLLNL LCRSEEAMVK HHTLYINLIS ENSTTRP00000010900/1-329 VLGELQFAFV CFLLGNVYEA FEHWKQLLNL LCRSEEAMVK HHTLYVNLIS 301 350 ENSP00000363043/1-384 ILYHQLGEIP ADFFVDIVSQ DNFLTSTLQ- --------VF FSSACSIAVD ENSBTAP00000051221/1-384 ILYHQLGEIP ADFFVDIVSQ DNFLTSTLQ- --------VF FSSARSVAVD bmy_00600T0/1-393 ILYHQLGEIP ADFFVDIVSQ DNFLTSTLQV SRLLADTQVF FSSACSVAVD ENSTTRP00000010900/1-329 ILYHQLGEIP ADFFVDIVSQ DNFLTSTLQ- ---------- ---------- 351 400 ENSP00000363043/1-384 ATLRKKAEKF QAHLTKKFRW DFAAEPEDCA PVVVELPEGI EMG ENSBTAP00000051221/1-384 ATLRQKAERF QAHLTKKFRW DFEAEPEDCA PVVVELPDGV GTG bmy_00600T0/1-393 ATLRQKAEKF QAHLTKKFQW DFEAEPEDCA PVVVVLPEGV GTG ENSTTRP00000010900/1-329 ---------- ---------- ---------- ---------- ---