KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:00:20 2014 Check: 00 .. Name: ENSP00000321963/1-433 Len: 440 Check: 3941 Weight: 1.00 Name: ENSTTRP00000010151/1-432 Len: 440 Check: 7930 Weight: 1.00 Name: ENSBTAP00000050537/1-415 Len: 440 Check: 7684 Weight: 1.00 Name: bmy_13322T0/1-321 Len: 440 Check: 4299 Weight: 1.00 Name: BACU005966/1-439 Len: 440 Check: 7441 Weight: 1.00 // 1 50 ENSP00000321963/1-433 MALDLRTIFQ CEPSENNLGS ENSAFQQSQG PAVQREEGIS EFSRMVLNSF ENSTTRP00000010151/1-432 MALDLRISFQ DEPSRKDPVS DNLELKPSQG SAIQEREGIS EFQSTQLSLF ENSBTAP00000050537/1-415 MSSDLRISFE GEPSRRGPGP EN---SPTQG SAIQEEEGIP EFPSTQLNLL bmy_13322T0/1-321 MALDLRISFQ DEPSRKDPGS DNLELKPSQG SAIQEGEGIS EFRSTQLSLF BACU005966/1-439 MALDLRISFQ DEPSRKDPGS DNLELKPSQG SAIQEGEGIS EFRSTQLSLF 51 100 ENSP00000321963/1-433 QDSNNSYARQ ELQRLYRIFH SWLQPEKHSK DEIISLLVLE QFMIGGHCND ENSTTRP00000010151/1-432 QNNNNSSARQ ELQRLYKLFH SWLQPEKHSK DEIISRLVLE QFMINGRCGD ENSBTAP00000050537/1-415 RDSNNLSARH ELQRLYHLFH SWLQPEKHSK DEIISHLVLE QFMISRNCSD bmy_13322T0/1-321 QNSNNSCARQ ELQRLYKLFH SWLQPEKHSK DEIISRLVLE QFMINGRCGD BACU005966/1-439 QNSNNSCARQ ELQRLYKLFH SWLQPEKHSK DEIISRLVLE QFMINGRCGD 101 150 ENSP00000321963/1-433 KASVKEKWKS SGKNLERFIE DLTDDSINPP ALVHVHMQGQ EALFSEDMPL ENSTTRP00000010151/1-432 RSTLQEKWNA SGRNLEKFME GLTDDGMKPP GLVHVHMQGQ EALFSENTPL ENSBTAP00000050537/1-415 RSTLQEKWKA SGRNLEKLME DLTDDGMEVP GLVHVHMQGR EALFCENMPL bmy_13322T0/1-321 RSTLQEKWNA SGRNLEKFME DLTDDGMKPP GLVHVHMQGQ EALFCENMPL BACU005966/1-439 RSTLQEKWNA SGRNLEKFME DLTDDGMKPP GLVHVHMQGQ EALFCENMPL 151 200 ENSP00000321963/1-433 RDVIVHLTKQ VNAQTTREAN MGTPSQTSQD TSLETGQGYE DEQDGWNSSS ENSTTRP00000010151/1-432 REVIVHFTKQ LSTGTPAREK MGTPFWMPQD TSLETRQXXX XXXXXXXXXX ENSBTAP00000050537/1-415 RQVIIHLTKQ LPAGTPTREN AGTLSWTPQD TSLETGQRNE GKENDGNISV bmy_13322T0/1-321 XEVIVHFTKQ LSTGTPAREN MGTPFWTPQD TSLETRQKSE GKENGGNISL BACU005966/1-439 REVIVHFTKQ LSTGTPAREN MGTPFWTPQD TSLETRQKSE GKENGGNISL 201 250 ENSP00000321963/1-433 KTTRVNENIT NQGNQIVSLI IIQEENGPRP EEGGVSSDNP YNSKR-AELV ENSTTRP00000010151/1-432 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXX-XXXX ENSBTAP00000050537/1-415 KS----DSIT SPSNQIPSLI IVQEENHLRL EEGGVSLENP RNSRRGAGPG bmy_13322T0/1-321 KTCQVNDRIT SPNNQLPFLL IIQEENSPRP EEGGVCLENP LSSRK-AGPG BACU005966/1-439 KTCQVNDRIA SPNNQIPFLL IIQEENSPRP EEGGVCLENP LSSRR-AGPG 251 300 ENSP00000321963/1-433 TARSQEGSIN GITFQGVPMV MGAGCISQPE QSSPESALTH QSNEGNSTCE ENSTTRP00000010151/1-432 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000050537/1-415 PSRPQDGSLK GPSSQDVLME VE------RD QVTPEPVSTL QSSEGTSARG bmy_13322T0/1-321 PSRSQEGSQK GPSYQDVLVE VEPEFLFKPD ZVTLEPVSTH QSTEGNSARG BACU005966/1-439 PSRSQEGSLK GPSYQDVLVE VEPEFLFKPD QVTLEPVSTH QNTEGNSARG 301 350 ENSP00000321963/1-433 VHQKGSHGVQ KSYKCEECPK VFKYLCHLLA HQRRHRNERP FVCPECQKGF ENSTTRP00000010151/1-432 XXXXXXXXAP KVYKCETCPK IFRY-SRLKV HQKRHNNERT YICAECGKGF ENSBTAP00000050537/1-415 EPQERSLRAP EVYRCERCPK TFRYSSRFRV HQKRHNNERT YICAECGKGF bmy_13322T0/1-321 EHQERFHRAP KVYKCETCPK IF-------- ---------- ---------- BACU005966/1-439 EHQERFHGAP KVYKCETCPK IFRYSSRLKV HQKRHNNERT YICAECGKGF 351 400 ENSP00000321963/1-433 FQISDLRVHQ IIHTGKKPFT CSMCKKSFSH KTNLRSHERI HTGEKPYTCP ENSTTRP00000010151/1-432 F-ASDLHVHQ RIHAGEKPFM CSMCEMAFNH KTNLRAHERI HTGEKPYVCS ENSBTAP00000050537/1-415 FQASDLHVHQ RIHTGEKPFV CSTCEMAFTH KTNLRTHERT HTGEKPYECS bmy_13322T0/1-321 ---------- ---------- ---------- ---------- ---------- BACU005966/1-439 FQASDLHVHQ RIHAGEKPFM CSMCEMAFSH KTNLRAHERI HTGEKPYVCS 401 450 ENSP00000321963/1-433 FCKTSYRQSS TYHRHMRTHE KITLPSVPST PEAS------ ENSTTRP00000010151/1-432 LCQRRFRQSS TYHRHLRFHQ KIALKSVPST LKAPL----- ENSBTAP00000050537/1-415 LCQRRFRQSS TYHRHRRFHQ KATLKSAP-- ---------- bmy_13322T0/1-321 ---------- ---------- ---------- ---------- BACU005966/1-439 LCQRRFRQSS TYHRHLRFHQ KIALKSVPST LNASLAMAPM