KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:00:01 2014 Check: 00 .. Name: ENSP00000262262/1-364 Len: 368 Check: 1037 Weight: 1.00 Name: ENSBTAP00000049861/1-351 Len: 368 Check: 5734 Weight: 1.00 Name: bmy_14029T0/1-330 Len: 368 Check: 5380 Weight: 1.00 Name: ENSTTRP00000003726/1-363 Len: 368 Check: 2444 Weight: 1.00 // 1 50 ENSP00000262262/1-364 ---MPLLLLL PLLWAGALAM DPNFWLQVQE SVTVQEGLCV LVPCTFFHPI ENSBTAP00000049861/1-351 MLPLLLPLLL PLLWAATLAQ DPNYWLKAPW SVSVQEGLCV RVPCSVYYPS bmy_14029T0/1-330 ---------- ---------- ---------- -----EGLCV RVPCSFHYPR ENSTTRP00000003726/1-363 ----MLPLLL SLLWAGSLAW DSRYRLEVQE SVTVQEGLCV RVPCSFYFPW 51 100 ENSP00000262262/1-364 PYYDKNSPVH GYWFREGAII SRDSPVATNK LDQEVQEETQ GRFRLLGDPS ENSBTAP00000049861/1-351 DFRSGSTPVH GFWFREGAEV LKDAPVATNK LDREAQKETQ GRFHLLGDPR bmy_14029T0/1-330 SYWD--VPAF GYWFREGANE KLDAPVATNN PDRKVQEETQ GRFNLLGDRG ENSTTRP00000003726/1-363 YSWDNSVPVF GYWFPEGADE KLDAPVATNN RHRKVQKETQ GRFRLLGDHG 101 150 ENSP00000262262/1-364 RNNCSLSIVD ARRRDNGSYF FRMERGSTKY SYKSPQLSVH VTDLTHRPKI ENSBTAP00000049861/1-351 DNNCSLEIRD ARKSDRGSYF FRMEKGSMKW SYLSELFFLN VTAFTHQPHL bmy_14029T0/1-330 DNDCSLDIRD ARRRDEGSYF FRVERGSALW SYKFNQLSLH VTALTHTPHI ENSTTRP00000003726/1-363 -NNCSLDIRD ARRRDQGSYF FRVERGKTLW NYRSKQLSLH VTALNHTPHI 151 200 ENSP00000262262/1-364 LIPGTLEPGH SKNLTCSVSW ACEQGTPPIF SWLSAAPTSL GPRTTHSSVL ENSBTAP00000049861/1-351 LSPGDLEPGH PGNMTCSVPW ACERAMPPIF SWTSAAPSSL GPRTPFSSVL bmy_14029T0/1-330 LISGVLESGR PGNLTCSVPW ACEQGTPPIF SWTSAALTSL GPRTHLSSVL ENSTTRP00000003726/1-363 LIPATLEAGR PGNLTCSVPW ACEQGAPPIF SWTSAALTSL GPRTHLSSVL 201 250 ENSP00000262262/1-364 IITPRPQDHG TNLTCQVKFA GAGVTTERTI QLNVTYVPQN PTTGIFPGDG ENSBTAP00000049861/1-351 TLTPRPQDHG TRLTCQVKFP RSGVMVERTI LLNVTW---- ---------- bmy_14029T0/1-330 TITAQPQDNG TNLTCQVKFP TSGVIVERTI QLNVTCAPQN PTRGVCLGDG ENSTTRP00000003726/1-363 TITPQPQDNG TNVTCQVKFP ASGVIVERTI QLSVTCAPRS PARGLCSGDG 251 300 ENSP00000262262/1-364 SGKQETRAGV VHGAIGGAGV TALLALCLCL IFFIVKTHRR KAARTAVGRN ENSBTAP00000049861/1-351 --ESGTGAGV TEGAIAGAGV TMLLVLCFGL IFFVVKIYRK KVAKTAVDME bmy_14029T0/1-330 TGKSGTRAGV IEGAIGGAGV TMLLVLCLCL IFFTVKTYRK KAARTAVGVE ENSTTRP00000003726/1-363 TGNSGTRAGV IEGALGGAGV TTLLVLCLCL IFFTVKTYRK RAARTAVGME 301 350 ENSP00000262262/1-364 DTHPTTGSAS PKHQKKSKLH GPTETSSCSG AAPTVEMDEE LHYASLNFHG ENSBTAP00000049861/1-351 DIYSAAEPAS LDHQQESKSE ESSDPTNYAG TTPSLELEQE LHYSSIIFRG bmy_14029T0/1-330 DIHPAIGPTS LHHQQESKLE DPPDPTSSAG ATPTLGMEQE LHYASLTFHG ENSTTRP00000003726/1-363 DIHPVIGPTS LDHQRESKLE DPPDPTSSAG ATPTSGMEEE LHYASLSFHG 351 400 ENSP00000262262/1-364 M-NPSKDTST EYSEVRTQ ENSBTAP00000049861/1-351 E-KPQESPHS EYAEIRIK bmy_14029T0/1-330 M-HLQESTHS EYAEIRTK ENSTTRP00000003726/1-363 MRHPQESAHS EYTEIRTK